HNRNPA2B1 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000122566 T37238_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA2B1
M024_0.6		 Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.814
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.814
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.814
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.793
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M024_0.6 RRM 23 92
M024_0.6 RRM 114 183

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000346694 RRM 23 92
ENSP00000346694 RRM 114 183
ENSP00000349101 RRM 11 80
ENSP00000349101 RRM 102 171
ENSP00000354021 RRM 23 92
ENSP00000354021 RRM 114 183
ENSP00000386735 RRM 23 92
ENSP00000386735 RRM 114 183

Links

Other RRM family RBPs
Other Homo sapiens RBPs

225 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.745
ENSGGOG00000010478 Gorilla gorilla ENSGGOG00000010478 N 0.000
ENSTBEG00000002499 Tupaia belangeri ENSTBEG00000002499 N 0.000
HNRNPA2B1 Sorex araneus ENSSARG00000007984 N 0.000
ENSPTRG00000019356 Pan troglodytes ENSPTRG00000019356 N 0.000
ENSPPYG00000018709 Pongo pygmaeus ENSPPYG00000018709 N 0.000
HNRNPA3 Macaca mulatta ENSMMUG00000011937 N 0.000
ENSMICG00000010912 Microcebus murinus ENSMICG00000010912 N 0.000
ENSMEUG00000008083 Macropus eugenii ENSMEUG00000008083 N 0.000
Ame_R004137 Ailuropoda melanoleuca Ame_R004137 N 0.000