e_gw1.17.191.1 (Trichoderma reesei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.17.191.1 T49810_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.17.191.1 RRM 57 127

Links

Other RRM family RBPs
Other Trichoderma reesei RBPs

162 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.746
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.944
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.704
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.817
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.727
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.986
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.718
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.718
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.718
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.761
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.746
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.718
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.740
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.944
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.972
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.958
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.915
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.779
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.944
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.732
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.803
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.704
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.746
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.746
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.746
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.746
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.746
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.746
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.732
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.704
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.718
SB04G025800 Sorghum bicolor Sb04g025800 N 0.718
PHUM535920 Pediculus humanus PHUM535920 N 0.803
NCU00210 Neurospora crassa NCU00210 N 0.944
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.761
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.718
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.704
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.732
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.746
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.845
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.817
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.718
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.958
MDP0000315402 Malus x domestica MDP0000315402 N 0.704
Kwal_11096 Kluyveromyces waltii Kwal_11096 N 0.704
KLTH0H05214g Kluyveromyces thermotolerans KLTH0H05214g N 0.732
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.740
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.887
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.901
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.944
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.915
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.704
CAA59259 Xenopus laevis CAA59259 N 0.704
AAH72902 Xenopus laevis AAH72902 N 0.704
2118330B Xenopus laevis 2118330B N 0.704
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.704
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.718
SAKL0A05588g Lachancea kluyveri SAKL0A05588g N 0.718
ppa010346m Prunus persica ppa010346m N 0.704
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.901
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.727
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.740
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.915
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.718
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.740
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.775
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.775
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.859
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.761
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.718
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.817
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.787
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.704
CAGL0C01529g Candida glabrata CAGL0C01529g N 0.718
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.746
A7TEB0_VANPO Vanderwaltozyma polyspora A7TEB0_VANPO N 0.704
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.732
Scas_Contig720.2 Saccharomyces castellii Scas_Contig720.2 N 0.704
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.704
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.787
P52299 Xenopus laevis P52299 N 0.704
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.761
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.915
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.944
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.887
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.803
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.817
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.915
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.831
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.915
TERG_03424 Trichophyton rubrum TERG_03424 N 0.915
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.901
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.789
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.704
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.718
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.789
PK11911.1 Cannabis sativa PK11911.1 N 0.718
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.761
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.930
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.930
PGTG_01720 Puccinia graminis PGTG_01720 N 0.761
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.915
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.704
CNBG_4502 Cryptococcus neoformans CNBG_4502 N 0.701
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.915
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.875
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.704
Bm1_02935 Brugia malayi Bm1_02935 N 0.746
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.915
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.944
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.915
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.930
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.915
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.944
MCYG_04468 Microsporum canis MCYG_04468 N 0.915
LOAG_03270 Loa loa LOAG_03270 N 0.761
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.915
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.958
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.944
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.847
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.789
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.718
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.732
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.718
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.746
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.746
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.746
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.718
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.732
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.746
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.732
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.746
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.732
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.732
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.718
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.732
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.746
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.732
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.746
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.746
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.732
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.746
NCBP2 Gallus gallus ENSGALG00000006843 N 0.718
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.817
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.704
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.915
An12g03930 Aspergillus niger CADANGAG00009835 N 0.901
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.915
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.887
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.831
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.704
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.732
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.746
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.732
NCBP2 Homo sapiens ENSG00000114503 N 0.746
NCBP2 Equus caballus ENSECAG00000016153 N 0.746
ncbp2 Danio rerio ENSDARG00000014898 N 0.718
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.732
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.746
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.732
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.746
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.746