PCBP3 (Pteropus vampyrus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPVAG00000000832 T19394_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.819
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.734
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.734
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.713
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.713
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000000783 KH 15 75
ENSPVAP00000000783 KH 99 162
ENSPVAP00000000783 KH 292 334

Links

Other KH family RBPs
Other Pteropus vampyrus RBPs

85 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.000
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.702
AAH41241 Xenopus laevis AAH41241 I 0.729
AAH84195 Xenopus laevis AAH84195 I 0.729
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.713
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.729
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.000
CAB50743 Xenopus laevis CAB50743 I 0.729
CAD29864 Xenopus laevis CAD29864 I 0.729
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.000
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.000
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.734
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.803
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.729
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.734
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.000
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.707
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.718
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.734
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.000
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.761
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.734
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.000
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.000
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.734
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.723
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.713
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.718
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.734
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.713
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.000
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.000
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.718
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.713
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.000
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.000
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.000
LOC100050101 Equus caballus ENSECAG00000012413 I 0.819
LOC100050579 Equus caballus ENSECAG00000002544 I 0.713
LOC100060660 Equus caballus ENSECAG00000024218 I 0.000
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.723
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.819
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.000
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.713
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.000
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.000
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.000
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.713
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.713
PCBP1 Homo sapiens ENSG00000169564 D 0.713
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.000
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.000
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.713
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.713
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.713
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.713
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.713
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.734
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.734
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.734
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.000
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.734
pcbp2 Danio rerio ENSDARG00000013184 D 0.734
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.734
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.734
PCBP2 Equus caballus ENSECAG00000022389 I 0.734
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.734
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.000
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.735
PCBP2 Homo sapiens ENSG00000197111 D 0.734
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.734
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.000
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.000
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.734
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.734
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.734
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.734
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.819
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.819
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.729
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.000
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.862
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.819
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.819
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.798
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.734
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.798
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.798
PCBP3 Gallus gallus ENSGALG00000013155 I 0.809
PCBP3 Homo sapiens ENSG00000183570 I 0.819
PCBP3 Gallus gallus ENSGALG00000004394 I 0.777
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.819
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.768
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.723
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.819
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.798
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.793
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.819
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.819
pcbp3 Danio rerio ENSDARG00000054378 I 0.713
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.751
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.770
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.718
PCBP3 Felis catus ENSFCAG00000014812 I 0.768
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.819
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.819
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.809
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.000
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.000
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.000
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.000
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.000
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.000
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.000
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.000
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.000
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.000
PCBP4 Homo sapiens ENSG00000090097 I 0.000
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.000
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.000
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.000
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.000
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.000
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.809
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.734