ELAVL2 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000007867 T42264_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.967
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.967
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.967
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.934
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.934
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.934
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.783
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.783
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.783
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.783
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.783
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.783
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000019560 RRM 2 71
ENSTRUP00000019560 RRM 87 155
ENSTRUP00000019560 RRM 239 309

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.925
AAA96942 Xenopus laevis AAA96942 I 0.782
AAA96943 Xenopus laevis AAA96943 I 0.958
AAA96944 Xenopus laevis AAA96944 I 0.892
AAA96945 Xenopus laevis AAA96945 I 0.920
AAH86269 Xenopus laevis AAH86269 I 0.777
AAH94189 Xenopus laevis AAH94189 I 0.962
AAH99348 Xenopus laevis AAH99348 I 0.920
AAI16460 Xenopus laevis AAI16460 I 0.743
AAI69769 Xenopus laevis AAI69769 I 0.892
AAI70539 Xenopus laevis AAI70539 I 0.962
AGAP000965 Anopheles gambiae AGAP000965 I 0.754
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.777
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.958
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.887
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.925
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.791
CAA59430 Xenopus laevis CAA59430 I 0.953
CBF67567 Xenopus laevis CBF67567 I 0.920
CBU92440 Xenopus laevis CBU92440 I 0.920
CPIJ000395 Culex quinquefasciatus CPIJ000395 I 0.719
CPIJ016143 Culex quinquefasciatus CPIJ016143 I 0.750
CpipJ_CPIJ000395 Culex pipiens CpipJ_CPIJ000395 I 0.719
CpipJ_CPIJ016143 Culex pipiens CpipJ_CPIJ016143 I 0.750
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.801
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.791
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.791
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.741
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.791
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.791
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.796
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.787
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.791
ELAVL1 Takifugu rubripes ENSTRUG00000007296 I 0.736
ELAVL1 Takifugu rubripes ENSTRUG00000004559 I 0.764
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.777
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.787
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.789
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.791
ELAVL1 Oryzias latipes ENSORLG00000000087 I 0.731
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.801
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.796
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.791
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.791
Elavl1 Mus musculus ENSMUSG00000040028 I 0.791
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.791
ELAVL1 Tetraodon nigroviridis ENSTNIG00000019823 I 0.774
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.777
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.782
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.791
ELAVL1 Homo sapiens ENSG00000066044 D 0.791
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.782
ELAVL1 Felis catus ENSFCAG00000014947 I 0.791
elavl1 Danio rerio ENSDARG00000038695 I 0.788
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.958
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.958
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.958
elavl2 Danio rerio ENSDARG00000040732 I 0.958
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.958
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.858
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.986
Elavl2 Mus musculus ENSMUSG00000008489 I 0.958
ELAVL2 Dasypus novemcinctus ENSDNOG00000016605 I 0.791
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.958
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.991
ELAVL2 Choloepus hoffmanni ENSCHOG00000000635 I 0.829
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.958
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.958
ELAVL2 Otolemur garnettii ENSOGAG00000016228 I 0.825
ELAVL2 Spermophilus tridecemlineatus ENSSTOG00000007792 I 0.754
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.958
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.958
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.962
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.741
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.896
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.958
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.939
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.958
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.958
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.986
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.958
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.943
ELAVL2 Macropus eugenii ENSMEUG00000006499 I 0.797
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.953
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.958
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.958
ELAVL2 Microcebus murinus ENSMICG00000001558 I 0.773
elavl2 Xenopus tropicalis ENSXETG00000009387 I 0.801
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.953
ELAVL2 Erinaceus europaeus ENSEEUG00000008733 I 0.791
ELAVL2 Homo sapiens ENSG00000107105 D 0.958
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.925
ELAVL2 Equus caballus ENSECAG00000020142 I 0.958
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.887
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.887
ELAVL3 Tupaia belangeri ENSTBEG00000006133 I 0.755
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.887
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.887
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.868
ELAVL3 Sorex araneus ENSSARG00000005949 I 0.736
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.896
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.877
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.887
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.887
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.888
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.896
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.863
Elavl3 Mus musculus ENSMUSG00000003410 I 0.877
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.887
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.888
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.877
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.887
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.892
elavl3 Danio rerio ENSDARG00000014420 I 0.896
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.884
ELAVL3 Homo sapiens ENSG00000196361 I 0.887
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.887
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.920
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.925
ELAVL4 Tupaia belangeri ENSTBEG00000011730 I 0.796
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.764
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.925
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.920
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.925
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.920
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.925
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.925
elavl4 Danio rerio ENSDARG00000045639 I 0.911
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.925
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.925
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.920
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.925
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.925
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.925
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.925
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.925
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.915
ELAVL4 Echinops telfairi ENSETEG00000013779 I 0.796
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.925
ELAVL4 Homo sapiens ENSG00000162374 D 0.925
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.925
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.925
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.854
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.925
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.925
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.925
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.925
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.925
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.915
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.925
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.925
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.925
Elavl4 Mus musculus ENSMUSG00000028546 I 0.925
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.925
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.791
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.925
ENSCPOG00000022816 Cavia porcellus ENSCPOG00000022816 I 0.744
ENSCSAVG00000003440 Ciona savignyi ENSCSAVG00000003440 I 0.726
ENSMODG00000003850 Monodelphis domestica ENSMODG00000003850 I 0.728
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.925
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.791
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.958
estExt_Genewise1Plus.C_1660036 Capitella teleta estExt_Genewise1Plus.C_1660036 I 0.712
fgenesh1_pg.C_scaffold_8000205 Daphnia pulex fgenesh1_pg.C_scaffold_8000205 I 0.745
fgenesh2_pg.C_sca_14000012 Lottia gigantea fgenesh2_pg.C_sca_14000012 I 0.744
fgenesh2_pg.scaffold_219000066 Branchiostoma floridae fgenesh2_pg.scaffold_219000066 I 0.797
GA28809-RA Drosophila pseudoobscura FBgn0250168 I 0.727
GE18193 Drosophila yakuba FBgn0235624 I 0.727
GF14992 Drosophila ananassae FBgn0092017 I 0.727
GG24901 Drosophila erecta FBgn0117030 I 0.727
GH13638 Drosophila grimshawi FBgn0121114 I 0.739
GI11879 Drosophila mojavensis FBgn0134637 I 0.727
GJ13991 Drosophila virilis FBgn0201209 I 0.727
GK14865 Drosophila willistoni FBgn0216870 I 0.727
GL26299 Drosophila persimilis FBgn0163881 I 0.744
GM18380 Drosophila sechellia FBgn0173287 I 0.727
hug Danio rerio ENSDARG00000016405 I 0.807
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.962
LOC100051268 Equus caballus ENSECAG00000022284 I 0.925
LOC100056901 Equus caballus ENSECAG00000020594 I 0.811
LOC100060819 Equus caballus ENSECAG00000019459 I 0.787
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.958
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.782
Q1JQ73 Xenopus laevis Q1JQ73 I 0.743
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.787
Q5U259 Xenopus laevis Q5U259 I 0.777
Q91584 Xenopus laevis Q91584 I 0.892
Q91903 Xenopus laevis Q91903 I 0.958
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.925
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.787
Rbp9 Drosophila melanogaster FBgn0010263 D 0.749