ENSSARG00000008882 (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000008882 T41337_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.800
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.800
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.800
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000008028 RRM 16 85
ENSSARP00000008028 RRM 107 176

Links

Other RRM family RBPs
Other Sorex araneus RBPs

182 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.800
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.800
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.800
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.000
LOC785445 Bos taurus ENSBTAG00000025621 I 0.752
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.766
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.000
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.716
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.000
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.786
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.793
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.779
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.709
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.725
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.000
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.745
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.000
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.743
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.745
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.745
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.800
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.700
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.764
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.779
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.779
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.730
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.800
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.730
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.723
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.000
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.800
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.718
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.000
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.779
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.000
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.000
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.739
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.720
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.702
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.720
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.000
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.723
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.800
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.736
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.000
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.000
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.702
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.000
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.779
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.718
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.000
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.000
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.711
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.745
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.711
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.000
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.000
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.771
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.000
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.704
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.000
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.704
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.000
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.000
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.716
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.000
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.709
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.000
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.706
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.000
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.000
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.000
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.000
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.786
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.739
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.771
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.800
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.714
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.738
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.800
LOC100054206 Equus caballus ENSECAG00000006699 I 0.732
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.786
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.793
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.800
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.764
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.000
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.793
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.730
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.800
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.000
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.800
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.779
HNRNPA1 Homo sapiens ENSG00000135486 D 0.800
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.771
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.807
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.807
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.000
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.000
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.000
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.000
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.793
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.786
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.711
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.730
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.779
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.800
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.759
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.000
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.000
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.800
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.780
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.718
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.000
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.000
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.000
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.779
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.800
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.800
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.739
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.786
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.793
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.800
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.800
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.793
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.800
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.807
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.752
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.793
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.786
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.779
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.793
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.800
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.000
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.800
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.800
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.800
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.800
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.800
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.764
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.000
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.800
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.779
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.800
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.746
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.779
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.730
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.743
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.730
ENSRNOG00000017651 Rattus norvegicus ENSRNOG00000017651 I 0.000
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.771
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.714
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.738
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.800
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.752
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.745
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.800
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.800
CBU92546 Xenopus laevis CBU92546 I 0.764
CBU92428 Xenopus laevis CBU92428 I 0.750
CBF67672 Xenopus laevis CBF67672 I 0.764
CBF67555 Xenopus laevis CBF67555 I 0.750
AAH72090 Xenopus laevis AAH72090 I 0.764
AAH45260 Xenopus laevis AAH45260 I 0.764
AAA49742 Xenopus laevis AAA49742 I 0.750
AAA49741 Xenopus laevis AAA49741 I 0.750
P17130 Xenopus laevis P17130 I 0.750
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.771