ENSGGOG00000025265 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000025265 T37925_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.865
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.865
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.865
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.844
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000020288 RRM 16 85
ENSGGOP00000020288 RRM 107 176

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

219 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.872
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.865
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.865
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.865
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.865
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.865
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.865
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.865
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.865
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.865
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.865
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.865
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.865
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.865
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.865
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.865
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.865
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.865
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.865
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.865
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.865
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.865
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.865
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.865
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.865
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.865
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.865
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.865
HNRNPA1 Homo sapiens ENSG00000135486 D 0.865
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.865
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.858
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.858
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.858
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.858
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.858
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.858
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.858
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.858
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.858
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.857
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.851
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.851
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.851
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.851
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.851
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.851
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.851
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.851
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.851
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.851
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.851
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.844
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.844
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.844
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.844
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.844
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.844
LOC785445 Bos taurus ENSBTAG00000025621 I 0.843
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.843
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.837
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.837
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.837
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.836
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.831
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.830
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.830
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.830
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.829
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.829
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.829
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.829
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.829
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.828
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.824
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.823
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.821
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.821
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.821
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.821
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.816
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.816
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.814
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.814
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.814
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.809
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.809
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.807
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.807
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.807
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.807
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.807
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.803
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.803
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.803
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.801
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.800
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.800
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.800
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.800
LOC100054206 Equus caballus ENSECAG00000006699 I 0.796
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.794
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.794
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.793
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.793
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.793
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.793
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.790
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.789
CBF67672 Xenopus laevis CBF67672 I 0.787
CBU92546 Xenopus laevis CBU92546 I 0.787
AAH72090 Xenopus laevis AAH72090 I 0.787
AAH45260 Xenopus laevis AAH45260 I 0.787
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.786
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.786
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.783
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.782
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.780
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.780
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.779
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.779
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.776
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.775
AAA49742 Xenopus laevis AAA49742 I 0.773
CBF67555 Xenopus laevis CBF67555 I 0.773
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.773
P17130 Xenopus laevis P17130 I 0.773
AAA49741 Xenopus laevis AAA49741 I 0.773
CBU92428 Xenopus laevis CBU92428 I 0.773
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.771
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.768
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.768
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.768
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.764
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.762
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.761
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.761
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.761
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.761
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.759
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.754
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.754
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.752
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.748
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.747
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.747
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.746
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.746
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.746
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.746
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.746
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.746
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.746
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.746
LOC781499 Bos taurus ENSBTAG00000021580 I 0.746
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.746
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.746
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.746
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.746
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.746
HNRNPA3 Homo sapiens ENSG00000170144 I 0.746
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.746
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.746
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.746
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.746
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.746
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.746
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.745
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.745
AAA49949 Xenopus laevis AAA49949 I 0.745
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.745
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.745
Gm8991 Mus musculus ENSMUSG00000059179 I 0.745
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.745
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.745
P51968 Xenopus laevis P51968 I 0.745
LOC100066794 Equus caballus ENSECAG00000023237 I 0.745
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.745
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.743
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.743
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.741
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.741
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.739
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.738
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.735
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.732
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.731
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.730
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.730
ENSMMUG00000005993 Macaca mulatta ENSMMUG00000005993 I 0.729
P51992 Xenopus laevis P51992 I 0.727
AAA49950 Xenopus laevis AAA49950 I 0.727
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.727
CBF67578 Xenopus laevis CBF67578 I 0.727
CBU92451 Xenopus laevis CBU92451 I 0.727
AAI69881 Xenopus laevis AAI69881 I 0.727
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.722
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.717
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.716
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.715
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.715
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.711
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.711
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.710
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.710
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.710
ENSSARG00000010620 Sorex araneus ENSSARG00000010620 I 0.709
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.709
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.708
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.706
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.705
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.704
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.704
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.704
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.703
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.703
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.703
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.703
zgc:66127 Danio rerio ENSDARG00000011020 I 0.702
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.702