ENSEEUG00000011837 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000011837 T36828_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.844
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.844
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.844
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.830
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.709
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000010777 RRM 16 85
ENSEEUP00000010777 RRM 107 176

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

202 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.871
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.844
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.844
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.844
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.844
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.844
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.844
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.844
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.844
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.844
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.844
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.844
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.844
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.844
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.844
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.844
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.844
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.844
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.844
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.844
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.844
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.844
HNRNPA1 Homo sapiens ENSG00000135486 D 0.844
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.844
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.844
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.844
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.844
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.837
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.837
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.837
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.837
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.837
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.837
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.837
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.837
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.837
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.836
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.830
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.830
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.830
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.830
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.830
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.830
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.830
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.830
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.830
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.830
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.823
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.823
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.823
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.823
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.823
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.823
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.816
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.816
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.816
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.816
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.816
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.816
LOC785445 Bos taurus ENSBTAG00000025621 I 0.814
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.814
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.810
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.809
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.809
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.809
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.809
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.807
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.807
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.807
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.803
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.801
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.801
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.800
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.800
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.800
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.800
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.794
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.794
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.794
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.793
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.793
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.793
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.793
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.793
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.787
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.786
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.786
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.786
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.782
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.780
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.780
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.779
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.779
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.779
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.779
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.779
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.779
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.779
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.779
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.775
AAH45260 Xenopus laevis AAH45260 I 0.773
CBU92546 Xenopus laevis CBU92546 I 0.773
CBF67672 Xenopus laevis CBF67672 I 0.773
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.773
AAH72090 Xenopus laevis AAH72090 I 0.773
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.773
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.771
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.769
LOC100054206 Equus caballus ENSECAG00000006699 I 0.768
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.768
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.768
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.768
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.764
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.764
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.762
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.762
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.761
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.759
AAA49742 Xenopus laevis AAA49742 I 0.759
AAA49741 Xenopus laevis AAA49741 I 0.759
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.759
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.759
CBU92428 Xenopus laevis CBU92428 I 0.759
CBF67555 Xenopus laevis CBF67555 I 0.759
P17130 Xenopus laevis P17130 I 0.759
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.757
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.757
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.754
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.754
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.754
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.750
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.748
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.748
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.746
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.746
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.746
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.746
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.745
AAA49949 Xenopus laevis AAA49949 I 0.745
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.745
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.745
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.745
P51968 Xenopus laevis P51968 I 0.745
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.743
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.743
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.739
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.739
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.739
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.739
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.739
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.739
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.739
HNRNPA3 Homo sapiens ENSG00000170144 I 0.739
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.739
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.739
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.739
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.739
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.739
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.739
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.739
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.739
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.739
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.739
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.739
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.739
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.739
LOC781499 Bos taurus ENSBTAG00000021580 I 0.739
Gm8991 Mus musculus ENSMUSG00000059179 I 0.738
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.738
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.738
LOC100066794 Equus caballus ENSECAG00000023237 I 0.738
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.738
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.738
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.736
P51992 Xenopus laevis P51992 I 0.734
AAI69881 Xenopus laevis AAI69881 I 0.734
CBU92451 Xenopus laevis CBU92451 I 0.734
CBF67578 Xenopus laevis CBF67578 I 0.734
AAA49950 Xenopus laevis AAA49950 I 0.734
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.733
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.732
zgc:66127 Danio rerio ENSDARG00000011020 I 0.730
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.730
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.730
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.729
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.725
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.718
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.716
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.716
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.715
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.714
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.710
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.709
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.708
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.706
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.705
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.704
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.704
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.703
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.702
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.701
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.701