ENSRNOG00000011100 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000011100 T41076_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.908
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.908
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.908
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.887
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.745
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000014756 RRM 7 76
ENSRNOP00000014756 RRM 98 166

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

248 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.908
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.908
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.908
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.908
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.908
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.908
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.908
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.908
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.908
HNRNPA1 Homo sapiens ENSG00000135486 D 0.908
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.908
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.908
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.908
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.908
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.908
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.908
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.908
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.908
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.908
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.908
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.908
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.908
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.908
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.908
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.908
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.908
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.908
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.908
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.908
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.901
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.901
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.901
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.901
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.901
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.901
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.894
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.894
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.894
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.894
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.894
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.894
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.894
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.894
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.894
LOC785445 Bos taurus ENSBTAG00000025621 I 0.893
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.887
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.887
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.887
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.887
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.887
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.887
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.886
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.886
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.879
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.879
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.879
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.879
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.879
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.879
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.879
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.873
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.872
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.872
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.872
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.871
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.871
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.871
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.865
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.865
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.865
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.865
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.865
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.864
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.864
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.858
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.857
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.857
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.857
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.857
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.857
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.851
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.851
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.851
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.851
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.850
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.850
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.846
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.844
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.843
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.843
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.843
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.843
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.839
LOC100054206 Equus caballus ENSECAG00000006699 I 0.838
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.838
AAH72090 Xenopus laevis AAH72090 I 0.837
AAH45260 Xenopus laevis AAH45260 I 0.837
CBU92546 Xenopus laevis CBU92546 I 0.837
CBF67672 Xenopus laevis CBF67672 I 0.837
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.836
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.836
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.836
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.836
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.836
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.836
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.831
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.831
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.829
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.829
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.829
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.829
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.829
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.827
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.824
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.824
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.824
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.824
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.824
AAA49742 Xenopus laevis AAA49742 I 0.823
P17130 Xenopus laevis P17130 I 0.823
AAA49741 Xenopus laevis AAA49741 I 0.823
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.823
CBF67555 Xenopus laevis CBF67555 I 0.823
CBU92428 Xenopus laevis CBU92428 I 0.823
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.817
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.816
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.816
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.816
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.811
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.810
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.809
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.807
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.807
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.807
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.804
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.803
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.803
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.801
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.801
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.796
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.796
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.796
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.796
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.796
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.796
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.796
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.796
HNRNPA3 Homo sapiens ENSG00000170144 I 0.796
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.796
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.796
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.796
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.796
LOC781499 Bos taurus ENSBTAG00000021580 I 0.796
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.796
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.796
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.796
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.796
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.796
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.796
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.796
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.796
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.795
P51968 Xenopus laevis P51968 I 0.794
Gm8991 Mus musculus ENSMUSG00000059179 I 0.794
AAA49949 Xenopus laevis AAA49949 I 0.794
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.794
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.794
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.794
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.794
LOC100066794 Equus caballus ENSECAG00000023237 I 0.794
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.793
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.793
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.793
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.789
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.787
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.787
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.786
AAA49950 Xenopus laevis AAA49950 I 0.783
AAI69881 Xenopus laevis AAI69881 I 0.783
CBF67578 Xenopus laevis CBF67578 I 0.783
CBU92451 Xenopus laevis CBU92451 I 0.783
P51992 Xenopus laevis P51992 I 0.783
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.782
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.776
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.775
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.773
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.773
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.773
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.768
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.762
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.762
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.762
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.757
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.754
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.754
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.753
zgc:66127 Danio rerio ENSDARG00000011020 I 0.752
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.752
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.752
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.752
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.750
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.748
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.746
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.746
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.745
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.745
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.745
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.743
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.743
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.741
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.741
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.738
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.738
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.738
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.738
ENSMMUG00000005993 Macaca mulatta ENSMMUG00000005993 I 0.736
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.733
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.731
ENSSARG00000010620 Sorex araneus ENSSARG00000010620 I 0.730
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.730
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.726
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.725
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.725
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.725
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.725
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.725
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.725
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.724
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.724
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.723
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.723
Q1KKS6_FUGRU Takifugu rubripes ENSTRUG00000017504 I 0.720
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.720
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.719
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.718
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.717
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.716
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.716
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.714
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.714
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.711
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.711
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.710
D4AB76_RAT Rattus norvegicus ENSRNOG00000032584 I 0.709
D3ZQR9_RAT Rattus norvegicus ENSRNOG00000027605 I 0.708
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.707
ENSMODG00000002376 Monodelphis domestica ENSMODG00000002376 I 0.703
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.703