ENSETEG00000001872 (Echinops telfairi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSETEG00000001872 T36872_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.795
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.795
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.795
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.774
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000001522 RRM 16 84
ENSETEP00000001522 RRM 96 165

Links

Other RRM family RBPs
Other Echinops telfairi RBPs

149 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45260 Xenopus laevis AAH45260 I 0.716
AAH72090 Xenopus laevis AAH72090 I 0.709
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.777
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.709
CBF67672 Xenopus laevis CBF67672 I 0.709
CBU92546 Xenopus laevis CBU92546 I 0.709
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.777
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.777
LOC785445 Bos taurus ENSBTAG00000025621 I 0.750
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.721
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.726
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.730
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.714
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.730
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.717
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.741
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.723
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.743
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.700
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.743
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.723
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.777
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.723
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.724
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.750
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.718
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.724
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.712
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.770
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.743
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.709
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.752
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.736
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.709
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.755
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.724
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.709
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.716
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.736
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.730
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.717
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.764
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.711
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.716
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.750
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.730
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.703
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.764
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.770
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.732
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.725
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.714
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.709
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.764
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.736
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.730
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.723
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.730
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.777
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.777
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.716
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.750
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.750
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.723
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.728
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.777
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.730
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.750
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.777
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.712
LOC100054206 Equus caballus ENSECAG00000006699 I 0.750
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.777
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.757
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.764
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.762
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.777
HNRNPA1 Homo sapiens ENSG00000135486 D 0.777
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.757
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.777
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.703
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.777
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.770
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.709
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.770
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.784
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.750
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.752
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.703
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.777
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.730
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.764
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.705
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.716
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.777
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.757
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.731
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.703
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.777
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.721
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.701
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.747
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.770
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.777
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.723
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.736
ENSMODG00000002376 Monodelphis domestica ENSMODG00000002376 I 0.712
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.733
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.703
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.750
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.777
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.764
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.777
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.750
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.764
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.770
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.736
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.757
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.764
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.770
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.777
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.770
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.757
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.724
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.770
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.741
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.710
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.750
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.777
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.777
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.777
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.777
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.777
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.743
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.723
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.723
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.723
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.748
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.743
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.733
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.777
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.743
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.712
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.777
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.716
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.777
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.723
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.770
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.777
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.723