ENSCAFG00000005164 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000005164 T35021_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.880
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.880
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.880
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.859
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.725
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000022576 RRM 16 81
ENSCAFP00000022576 RRM 106 177

Links

Other RRM family RBPs
Other Canis familiaris RBPs

247 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.866
HNRNPA1 Homo sapiens ENSG00000135486 D 0.866
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.866
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.866
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.866
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.866
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.866
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.866
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.866
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.866
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.866
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.866
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.866
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.866
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.866
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.866
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.866
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.866
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.866
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.866
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.866
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.866
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.866
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.866
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.866
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.866
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.866
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.859
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.859
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.859
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.859
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.859
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.859
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.859
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.852
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.852
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.852
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.852
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.852
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.852
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.852
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.852
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.852
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.851
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.848
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.845
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.845
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.845
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.845
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.845
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.845
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.845
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.845
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.839
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.838
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.838
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.838
LOC100054206 Equus caballus ENSECAG00000006699 I 0.838
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.838
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.838
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.838
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.838
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.838
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.838
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.838
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.838
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.831
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.831
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.831
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.831
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.831
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.831
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.831
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.831
LOC785445 Bos taurus ENSBTAG00000025621 I 0.831
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.830
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.825
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.825
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.824
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.824
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.824
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.824
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.824
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.824
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.823
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.817
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.817
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.817
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.817
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.817
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.817
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.816
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.810
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.810
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.810
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.810
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.810
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.810
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.810
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.804
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.803
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.803
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.803
AAH72090 Xenopus laevis AAH72090 I 0.803
AAH45260 Xenopus laevis AAH45260 I 0.803
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.803
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.803
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.803
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.803
CBU92546 Xenopus laevis CBU92546 I 0.803
CBF67672 Xenopus laevis CBF67672 I 0.803
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.801
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.796
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.796
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.796
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.796
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.794
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.789
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.789
AAA49742 Xenopus laevis AAA49742 I 0.789
AAA49741 Xenopus laevis AAA49741 I 0.789
P17130 Xenopus laevis P17130 I 0.789
CBU92428 Xenopus laevis CBU92428 I 0.789
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.789
CBF67555 Xenopus laevis CBF67555 I 0.789
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.787
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.785
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.784
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.782
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.782
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.782
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.775
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.775
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.775
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.775
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.775
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.769
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.769
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.768
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.768
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.768
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.766
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.766
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.762
P51968 Xenopus laevis P51968 I 0.761
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.761
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.761
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.761
AAA49949 Xenopus laevis AAA49949 I 0.761
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.761
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.761
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.760
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.759
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.759
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.755
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.755
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.755
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.755
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.755
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.755
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.755
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.755
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.755
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.755
HNRNPA3 Homo sapiens ENSG00000170144 I 0.755
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.755
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.755
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.755
LOC781499 Bos taurus ENSBTAG00000021580 I 0.755
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.755
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.755
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.755
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.755
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.755
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.755
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.755
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.754
LOC100066794 Equus caballus ENSECAG00000023237 I 0.754
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.754
Gm8991 Mus musculus ENSMUSG00000059179 I 0.754
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.754
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.754
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.752
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.752
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.752
CBF67578 Xenopus laevis CBF67578 I 0.750
AAA49950 Xenopus laevis AAA49950 I 0.750
P51992 Xenopus laevis P51992 I 0.750
AAI69881 Xenopus laevis AAI69881 I 0.750
CBU92451 Xenopus laevis CBU92451 I 0.750
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.748
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.746
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.746
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.745
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.745
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.743
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.743
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.739
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.739
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.739
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.739
ENSCAFG00000006386 Canis familiaris ENSCAFG00000006386 I 0.739
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.738
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.732
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.732
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.731
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.729
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.725
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.725
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.725
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.724
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.724
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.724
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.723
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.720
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.719
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.719
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.718
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.717
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.717
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.716
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.715
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.714
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.714
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.713
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.711
zgc:66127 Danio rerio ENSDARG00000011020 I 0.711
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.711
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.710
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.708
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.708
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.707
ENSMMUG00000022219 Macaca mulatta ENSMMUG00000022219 I 0.706
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.706
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.705
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.705
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.704
ENSCAFG00000005307 Canis familiaris ENSCAFG00000005307 I 0.704
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.703
D3ZQR9_RAT Rattus norvegicus ENSRNOG00000027605 I 0.701
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.701
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.701
ENSRNOG00000031316 Rattus norvegicus ENSRNOG00000031316 I 0.701
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.700