Medtr8g088990 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr8g088990 T54607_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr8g088990.1 RRM 57 127

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTBP1 Homo sapiens ENSG00000011304 D 0.000
Ptbp1 Rattus norvegicus ENSRNOG00000010448 I 0.000
PTBP1 Pteropus vampyrus ENSPVAG00000008288 I 0.000
XR_025154.1 Pan troglodytes ENSPTRG00000010165 I 0.000
ENSPPYG00000019504 Pongo pygmaeus ENSPPYG00000019504 I 0.000
ENSPPYG00000009289 Pongo pygmaeus ENSPPYG00000009289 I 0.000
PTBP1 Oryzias latipes ENSORLG00000014019 I 0.000
PTBP1 Oryzias latipes ENSORLG00000011430 I 0.000
ROD1 Oryctolagus cuniculus ENSOCUG00000017670 I 0.000
PTBP1 Ornithorhynchus anatinus ENSOANG00000009191 I 0.000
AAH45068 Xenopus laevis AAH45068 I 0.000
Rod1 Rattus norvegicus ENSRNOG00000016334 I 0.000
AAF00041 Xenopus laevis AAF00041 I 0.000
ptbp1 Xenopus tropicalis ENSXETG00000021661 I 0.000
rod1 Xenopus tropicalis ENSXETG00000002225 I 0.000
PTBP1 Tursiops truncatus ENSTTRG00000003439 I 0.000
PTBP1 Takifugu rubripes ENSTRUG00000011360 I 0.000
PTBP1 Takifugu rubripes ENSTRUG00000010168 I 0.000
PTBP1 Taeniopygia guttata ENSTGUG00000000641 I 0.000
PTBP1 Sus scrofa ENSSSCG00000013421 I 0.000
ROD1 Sus scrofa ENSSSCG00000005466 I 0.000
Rod1 Mus musculus ENSMUSG00000028382 I 0.000
Ptbp1 Mus musculus ENSMUSG00000006498 I 0.000
PTBP1 Monodelphis domestica ENSMODG00000006302 I 0.000
ROD1 Danio rerio ENSDARG00000043757 I 0.000
ptbp1b Danio rerio ENSDARG00000031907 I 0.000
ptbp1a Danio rerio ENSDARG00000019362 I 0.000
PTBP1 Cavia porcellus ENSCPOG00000025512 I 0.000
ROD1 Cavia porcellus ENSCPOG00000011586 I 0.000
PTBP1 Callithrix jacchus ENSCJAG00000020162 I 0.000
PTBP1 Canis familiaris ENSCAFG00000019693 I 0.000
ROD1 Bos taurus ENSBTAG00000016750 I 0.000
PTBP1 Equus caballus ENSECAG00000018845 I 0.000
ROD1 Equus caballus ENSECAG00000021243 I 0.000
ROD1 Homo sapiens ENSG00000119314 I 0.000
ROD1 Monodelphis domestica ENSMODG00000005502 I 0.000
PTBP1 Macaca mulatta ENSMMUG00000016450 I 0.000
ROD1 Macaca mulatta ENSMMUG00000000464 I 0.000
PTBP1 Meleagris gallopavo ENSMGAG00000003503 I 0.000
PTBP1 Macropus eugenii ENSMEUG00000006710 I 0.000
ROD1 Loxodonta africana ENSLAFG00000011358 I 0.000
ROD1 Gorilla gorilla ENSGGOG00000001755 I 0.000
Q5F456_CHICK Gallus gallus ENSGALG00000001962 I 0.000
ROD1 Anolis carolinensis ENSACAG00000017316 I 0.000