CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_04164
(
Microsporum gypseum
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
MGYG_04164
T23858_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_04164T0
PUF
507
541
AIANQAYPLMINRFGNFLVQRCFEHGTPEQVISIA
MGYG_04164T0
PUF
543
576
AIRGNTLSLSMDPFGCHVIQKAFDCVPEEHKAVM
MGYG_04164T0
PUF
583
604
RIPETVIHRYACHVWQKLFELR
MGYG_04164T0
PUF
620
653
LRGMWHEVALGETGSLVVQNIFENCVEDEKRQAI
MGYG_04164T0
PUF
655
689
EVLAKIDLLAHGQFGNWCIQHICEHGAPPDKSRAI
MGYG_04164T0
PUF
696
725
VTDYSMDQFASKVVEKCLKIGGTEFLDRYL
MGYG_04164T0
PUF
740
767
LIDIAGDQYGNYLIQWILLNAGNQHREL
Links
Other
PUF
family RBPs
Other
Microsporum gypseum
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
62194
Helobdella robusta
62194
I
0.000
A6H7B7_BOVIN
Bos taurus
ENSBTAG00000011596
I
0.000
A6MLI3_CALJA
Callithrix jacchus
ENSCJAG00000014884
I
0.000
A7MB38_BOVIN
Bos taurus
ENSBTAG00000013309
I
0.000
AAH44085
Xenopus laevis
AAH44085
I
0.000
AAH44265
Xenopus laevis
AAH44265
I
0.000
AAH46668
Xenopus laevis
AAH46668
I
0.000
AAH71160
Xenopus laevis
AAH71160
I
0.000
AGAP004592
Anopheles gambiae
AGAP004592
I
0.000
amel4_ncbi_hmm6583
Apis mellifera
amel4_ncbi_hmm6583
I
0.000
Ame_R004936
Ailuropoda melanoleuca
Ame_R004936
I
0.000
Ame_R018370
Ailuropoda melanoleuca
Ame_R018370
I
0.000
Aqu1.218342
Amphimedon queenslandica
Aqu1.218342
N
0.000
B52
Drosophila melanogaster
FBgn0004587
D
0.000
CPIJ008634
Culex quinquefasciatus
CPIJ008634
I
0.000
CpipJ_CPIJ008634
Culex pipiens
CpipJ_CPIJ008634
I
0.000
ENSACAG00000005544
Anolis carolinensis
ENSACAG00000005544
I
0.000
ENSCING00000004873
Ciona intestinalis
ENSCING00000004873
I
0.000
ENSCING00000012370
Ciona intestinalis
ENSCING00000012370
I
0.000
ENSCSAVG00000002581
Ciona savignyi
ENSCSAVG00000002581
I
0.000
ENSGACG00000011761
Gasterosteus aculeatus
ENSGACG00000011761
I
0.000
ENSMGAG00000011888
Meleagris gallopavo
ENSMGAG00000011888
I
0.000
ENSPPYG00000001629
Pongo pygmaeus
ENSPPYG00000001629
I
0.000
ENSPPYG00000005945
Pongo pygmaeus
ENSPPYG00000005945
I
0.000
ENSPPYG00000011019
Pongo pygmaeus
ENSPPYG00000011019
I
0.000
estExt_fgenesh1_pg.C_3000025
Capitella teleta
estExt_fgenesh1_pg.C_3000025
I
0.000
estExt_fgenesh2_pg.C_920027
Branchiostoma floridae
estExt_fgenesh2_pg.C_920027
I
0.000
estExt_fgenesh2_pm.C_690014
Branchiostoma floridae
estExt_fgenesh2_pm.C_690014
I
0.000
estExt_Genewise1Plus.C_150169
Daphnia pulex
estExt_Genewise1Plus.C_150169
I
0.000
estExt_Genewise1Plus.C_sca_890186
Lottia gigantea
estExt_Genewise1Plus.C_sca_890186
I
0.000
e_gw1.89.27.1
Lottia gigantea
e_gw1.89.27.1
I
0.000
GA10599-RA
Drosophila pseudoobscura
FBgn0070656
I
0.000
GF17608
Drosophila ananassae
FBgn0094626
I
0.000
GH18528
Drosophila grimshawi
FBgn0125995
I
0.000
GI22065
Drosophila mojavensis
FBgn0144794
I
0.000
GJ24113
Drosophila virilis
FBgn0211197
I
0.000
GK13948
Drosophila willistoni
FBgn0215954
I
0.000
GL23543
Drosophila persimilis
FBgn0161133
I
0.000
LOC100053264
Equus caballus
ENSECAG00000026873
I
0.000
LOC100402973
Callithrix jacchus
ENSCJAG00000009971
I
0.000
PACS2
Takifugu rubripes
ENSTRUG00000010740
I
0.000
PHUM290500
Pediculus humanus
PHUM290500
I
0.000
Q5ZKT4_CHICK
Gallus gallus
ENSGALG00000009484
I
0.000
Q5ZLF9_CHICK
Gallus gallus
ENSGALG00000009421
I
0.000
Sfrs4
Rattus norvegicus
ENSRNOG00000010007
I
0.000
Sfrs5
Rattus norvegicus
ENSRNOG00000005513
I
0.000
SFRS5
Taeniopygia guttata
ENSTGUG00000011425
I
0.000
SFRS6
Taeniopygia guttata
ENSTGUG00000003455
I
0.000
Sfrs6
Rattus norvegicus
ENSRNOG00000006380
I
0.000
SFRS6_BOVIN
Bos taurus
ENSBTAG00000008527
I
0.000
SRSF4
Oryzias latipes
ENSORLG00000009430
I
0.000
SRSF4
Procavia capensis
ENSPCAG00000009879
I
0.000
SRSF4
Loxodonta africana
ENSLAFG00000002575
I
0.000
SRSF4
Pan troglodytes
ENSPTRG00000000445
I
0.000
SRSF4
Tursiops truncatus
ENSTTRG00000002572
I
0.000
SRSF4
Sus scrofa
ENSSSCG00000003588
I
0.000
SRSF4
Gasterosteus aculeatus
ENSGACG00000002389
I
0.000
SRSF4
Tetraodon nigroviridis
ENSTNIG00000000115
I
0.000
SRSF4
Tetraodon nigroviridis
ENSTNIG00000005573
I
0.000
SRSF4
Takifugu rubripes
ENSTRUG00000011891
I
0.000
SRSF4
Homo sapiens
ENSG00000116350
I
0.000
srsf4
Xenopus tropicalis
ENSXETG00000014380
I
0.000
SRSF4
Erinaceus europaeus
ENSEEUG00000008479
I
0.000
Srsf4
Dipodomys ordii
ENSDORG00000002459
I
0.000
SRSF4
Dasypus novemcinctus
ENSDNOG00000000968
I
0.000
SRSF4
Cavia porcellus
ENSCPOG00000007263
I
0.000
SRSF4
Ochotona princeps
ENSOPRG00000010098
I
0.000
SRSF4
Macaca mulatta
ENSMMUG00000007110
I
0.000
Srsf4
Mus musculus
ENSMUSG00000028911
I
0.000
SRSF4
Meleagris gallopavo
ENSMGAG00000002400
I
0.000
SRSF4
Oryctolagus cuniculus
ENSOCUG00000001837
I
0.000
SRSF4
Myotis lucifugus
ENSMLUG00000014770
I
0.000
SRSF4
Tarsius syrichta
ENSTSYG00000007903
I
0.000
SRSF4
Monodelphis domestica
ENSMODG00000011052
I
0.000
srsf5
Xenopus tropicalis
ENSXETG00000002211
I
0.000
SRSF5
Vicugna pacos
ENSVPAG00000006448
I
0.000
SRSF5
Tursiops truncatus
ENSTTRG00000003318
I
0.000
SRSF5
Homo sapiens
ENSG00000100650
D
0.000
SRSF5
Tarsius syrichta
ENSTSYG00000007786
I
0.000
SRSF5
Tetraodon nigroviridis
ENSTNIG00000016411
I
0.000
SRSF5
Takifugu rubripes
ENSTRUG00000017811
I
0.000
SRSF5
Macaca mulatta
ENSMMUG00000022407
I
0.000
SRSF5
Felis catus
ENSFCAG00000008848
I
0.000
SRSF5
Meleagris gallopavo
ENSMGAG00000011835
N
0.000
SRSF5
Canis familiaris
ENSCAFG00000016589
I
0.000
SRSF5
Cavia porcellus
ENSCPOG00000005949
I
0.000
SRSF5
Monodelphis domestica
ENSMODG00000011362
I
0.000
SRSF5
Dasypus novemcinctus
ENSDNOG00000006160
I
0.000
SRSF5
Microcebus murinus
ENSMICG00000009661
I
0.000
Srsf5
Dipodomys ordii
ENSDORG00000003989
I
0.000
SRSF5
Myotis lucifugus
ENSMLUG00000011939
I
0.000
SRSF5
Echinops telfairi
ENSETEG00000020396
I
0.000
SRSF5
Anolis carolinensis
ENSACAG00000005143
I
0.000
SRSF5
Gorilla gorilla
ENSGGOG00000016462
I
0.000
SRSF5
Loxodonta africana
ENSLAFG00000005260
I
0.000
SRSF5
Pan troglodytes
ENSPTRG00000006488
I
0.000
SRSF5
Pteropus vampyrus
ENSPVAG00000009828
I
0.000
Srsf5
Mus musculus
ENSMUSG00000021134
I
0.000
SRSF5
Ochotona princeps
ENSOPRG00000008286
I
0.000
SRSF5
Procavia capensis
ENSPCAG00000004405
N
0.000
SRSF5
Sorex araneus
ENSSARG00000001059
I
0.000
SRSF5
Oryctolagus cuniculus
ENSOCUG00000009274
I
0.000
SRSF5
Sus scrofa
ENSSSCG00000002312
I
0.000
SRSF5
Gasterosteus aculeatus
ENSGACG00000007834
I
0.000
SRSF5
Ornithorhynchus anatinus
ENSOANG00000013336
I
0.000
SRSF5
Oryzias latipes
ENSORLG00000009268
I
0.000
SRSF5
Tupaia belangeri
ENSTBEG00000001972
I
0.000
srsf5a
Danio rerio
ENSDARG00000029818
I
0.000
srsf5b
Danio rerio
ENSDARG00000027734
I
0.000
SRSF6
Procavia capensis
ENSPCAG00000010954
I
0.000
SRSF6
Oryzias latipes
ENSORLG00000003530
I
0.000
SRSF6
Dasypus novemcinctus
ENSDNOG00000008410
I
0.000
SRSF6
Callithrix jacchus
ENSCJAG00000017888
I
0.000
SRSF6
Anolis carolinensis
ENSACAG00000002061
I
0.000
SRSF6
Microcebus murinus
ENSMICG00000008537
I
0.000
Srsf6
Dipodomys ordii
ENSDORG00000001945
I
0.000
SRSF6
Monodelphis domestica
ENSMODG00000003107
I
0.000
SRSF6
Takifugu rubripes
ENSTRUG00000003244
I
0.000
SRSF6
Homo sapiens
ENSG00000124193
I
0.000
SRSF6
Gasterosteus aculeatus
ENSGACG00000006084
I
0.000
Srsf6
Mus musculus
ENSMUSG00000016921
I
0.000
SRSF6
Gorilla gorilla
ENSGGOG00000009808
I
0.000
SRSF6
Macropus eugenii
ENSMEUG00000014615
I
0.000
SRSF6
Echinops telfairi
ENSETEG00000006221
I
0.000
srsf6
Xenopus tropicalis
ENSXETG00000025503
I
0.000
SRSF6
Tetraodon nigroviridis
ENSTNIG00000001692
I
0.000
SRSF6
Pteropus vampyrus
ENSPVAG00000015232
I
0.000
srsf6a
Danio rerio
ENSDARG00000013729
I
0.000
srsf6b
Danio rerio
ENSDARG00000016783
I
0.000
XB-GENE-5954653
Xenopus tropicalis
ENSXETG00000017937
I
0.000
XP_001180940.1
Strongylocentrotus purpuratus
XP_001180940.1
I
0.000
XP_002200515.1
Taeniopygia guttata
ENSTGUG00000011492
I
0.000
XP_798746.1
Strongylocentrotus purpuratus
XP_798746.1
I
0.000