FXR1 (Echinops telfairi)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSETEG00000006891 T18752_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		1.000
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.783
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000005588 KH 218 277
ENSETEP00000005588 KH 282 349

Links

Other KH family RBPs
Other Echinops telfairi RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s1082g1t1 Acyrtosiphon pisum DGIL_AUG5s1082g1t1 I 0.000
AAEL012420 Aedes aegypti AAEL012420 I 0.000
Ame_R002800 Ailuropoda melanoleuca Ame_R002800 I 0.000
Ame_R012380 Ailuropoda melanoleuca Ame_R012380 I 0.000
PUM1 Anolis carolinensis ENSACAG00000000682 I 0.000
PUM2 Anolis carolinensis ENSACAG00000010491 I 0.000
AGAP003914 Anopheles gambiae AGAP003914 I 0.000
amel4_ncbi_hmm4895 Apis mellifera amel4_ncbi_hmm4895 I 0.000
BGIBMGA003401 Bombyx mori BGIBMGA003401 I 0.000
PUM2 Bos taurus ENSBTAG00000011155 I 0.000
PUM1 Bos taurus ENSBTAG00000018979 I 0.000
LOC100415491 Callithrix jacchus ENSCJAG00000006035 I 0.000
PUM2 Callithrix jacchus ENSCJAG00000007450 I 0.000
PUM1 Canis familiaris ENSCAFG00000011205 I 0.000
PUM2 Canis familiaris ENSCAFG00000003839 I 0.000
estExt_Genewise1Plus.C_4390035 Capitella teleta estExt_Genewise1Plus.C_4390035 I 0.000
PUM2 Cavia porcellus ENSCPOG00000007075 I 0.000
ENSCING00000003888 Ciona intestinalis ENSCING00000003888 I 0.000
CpipJ_CPIJ016844 Culex pipiens CpipJ_CPIJ016844 I 0.000
CPIJ016844 Culex quinquefasciatus CPIJ016844 I 0.000
PASA_GEN_0800110 Daphnia pulex PASA_GEN_0800110 I 0.000
GF18428 Drosophila ananassae FBgn0095446 I 0.000
GG17394 Drosophila erecta FBgn0109620 I 0.000
GH15257 Drosophila grimshawi FBgn0122732 I 0.000
pum Drosophila melanogaster FBgn0003165 D 0.000
GI22503 Drosophila mojavensis FBgn0145231 I 0.000
GL22345 Drosophila persimilis FBgn0159937 I 0.000
GA27465-RA Drosophila pseudoobscura FBgn0248832 I 0.000
GM26283 Drosophila sechellia FBgn0181138 I 0.000
GJ10105 Drosophila virilis FBgn0197393 I 0.000
GK14049 Drosophila willistoni FBgn0216055 I 0.000
GE24797 Drosophila yakuba FBgn0241899 I 0.000
PUM1 Equus caballus ENSECAG00000021369 I 0.000
PUM2 Equus caballus ENSECAG00000021930 I 0.000
PUM1 Erinaceus europaeus ENSEEUG00000003871 I 0.000
Q2VB18_CHICK Gallus gallus ENSGALG00000016481 I 0.000
PUM1_CHICK Gallus gallus ENSGALG00000000597 I 0.000
PUM2 Gasterosteus aculeatus ENSGACG00000009670 I 0.000
PUM1 Gasterosteus aculeatus ENSGACG00000005717 I 0.000
PUM2 Gorilla gorilla ENSGGOG00000011374 I 0.000
105390 Helobdella robusta 105390 I 0.000
PUM1 Homo sapiens ENSG00000134644 D 0.000
PUM2 Homo sapiens ENSG00000055917 D 0.000
estExt_Genewise1Plus.C_sca_670070 Lottia gigantea estExt_Genewise1Plus.C_sca_670070 I 0.000
PUM1 Loxodonta africana ENSLAFG00000003178 I 0.000
Q3YAQ1_MACMU Macaca mulatta ENSMMUG00000013520 I 0.000
PUM1 Meleagris gallopavo ENSMGAG00000000724 I 0.000
PUM2 Meleagris gallopavo ENSMGAG00000014040 I 0.000
PUM1 Microcebus murinus ENSMICG00000007713 I 0.000
PUM1 Monodelphis domestica ENSMODG00000017067 I 0.000
PUM2 Monodelphis domestica ENSMODG00000009811 I 0.000
Pum2 Mus musculus ENSMUSG00000020594 D 0.000
Pum1 Mus musculus ENSMUSG00000028580 I 0.000
nasonia_NCBI_hmm823294 Nasonia vitripennis nasonia_NCBI_hmm823294 I 0.000
e_gw.54.41.1 Nematostella vectensis e_gw.54.41.1 I 0.000
ENSOANG00000003230 Ornithorhynchus anatinus ENSOANG00000003230 I 0.000
PUM1 Oryctolagus cuniculus ENSOCUG00000008641 I 0.000
PUM2 Oryctolagus cuniculus ENSOCUG00000017908 I 0.000
PUM2 Oryzias latipes ENSORLG00000012611 I 0.000
PUM1 Oryzias latipes ENSORLG00000011482 I 0.000
PUM2 Pan troglodytes ENSPTRG00000011692 I 0.000
PUM1 Pan troglodytes ENSPTRG00000000453 I 0.000
PHUM490070 Pediculus humanus PHUM490070 I 0.000
ENSPPYG00000001621 Pongo pygmaeus ENSPPYG00000001621 I 0.000
ENSPPYG00000012617 Pongo pygmaeus ENSPPYG00000012617 I 0.000
PUM1 Pteropus vampyrus ENSPVAG00000005207 I 0.000
Pum2 Rattus norvegicus ENSRNOG00000006180 I 0.000
Pum1 Rattus norvegicus ENSRNOG00000011709 I 0.000
PUM1 Sorex araneus ENSSARG00000003055 I 0.000
XP_001187223.1 Strongylocentrotus purpuratus XP_001187223.1 I 0.000
XP_794621.2 Strongylocentrotus purpuratus XP_794621.2 I 0.000
PUM2 Sus scrofa ENSSSCG00000008600 I 0.000
PUM1 Sus scrofa ENSSSCG00000003591 I 0.000
PUM2 Taeniopygia guttata ENSTGUG00000013149 I 0.000
PUM1 Takifugu rubripes ENSTRUG00000013121 I 0.000
PUM2 Takifugu rubripes ENSTRUG00000018167 I 0.000
PUM2 Tarsius syrichta ENSTSYG00000014463 I 0.000
PUM1 Tetraodon nigroviridis ENSTNIG00000016983 I 0.000
e_gw1.9.429.1 Trichoplax adhaerens e_gw1.9.429.1 I 0.000
PUM2 Tupaia belangeri ENSTBEG00000008729 I 0.000
PUM1 Tursiops truncatus ENSTTRG00000007436 I 0.000
PUM2 Tursiops truncatus ENSTTRG00000004887 I 0.000
PUM1 Vicugna pacos ENSVPAG00000005902 I 0.000
PUM2 Vicugna pacos ENSVPAG00000005056 I 0.000
AAH80379 Xenopus laevis AAH80379 I 0.000
AAL14121 Xenopus laevis AAL14121 I 0.000
BAB20864 Xenopus laevis BAB20864 I 0.000
BAC57980 Xenopus laevis BAC57980 I 0.000
pum2 Xenopus tropicalis ENSXETG00000008903 I 0.000