nasonia_NCBI_hmm338954 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm338954 T32219_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
orb2
M120_0.6 		Drosophila melanogaster KUUUKKK RNAcompete
Ray et al.(2013)
RNCMPT00126 		0.920
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.899
CPEB2
M012_0.6 		Homo sapiens CHUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00012 		0.877
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm338954 RRM 92 156
nasonia_NCBI_hmm338954 RRM 200 270

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

152 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R008231 Ailuropoda melanoleuca Ame_R008231 N 0.000
UHMK1 Bos taurus ENSBTAG00000012694 N 0.000
UHMK1 Callithrix jacchus ENSCJAG00000004291 N 0.000
UHMK1 Canis familiaris ENSCAFG00000013095 N 0.000
UHMK1 Cavia porcellus ENSCPOG00000004561 N 0.000
UHMK1 Choloepus hoffmanni ENSCHOG00000011101 N 0.000
uhmk1 Danio rerio ENSDARG00000059575 N 0.000
UHMK1 Dasypus novemcinctus ENSDNOG00000009922 N 0.000
Uhmk1 Dipodomys ordii ENSDORG00000011233 N 0.000
LOC100058796 Equus caballus ENSECAG00000008744 N 0.000
UHMK1 Erinaceus europaeus ENSEEUG00000011231 N 0.000
UHMK1 Felis catus ENSFCAG00000014123 N 0.000
UHMK1 Gallus gallus ENSGALG00000002734 N 0.000
UHMK1 Gasterosteus aculeatus ENSGACG00000003529 N 0.000
UHMK1 Gorilla gorilla ENSGGOG00000002032 N 0.000
UHMK1 Homo sapiens ENSG00000152332 N 0.000
UHMK1 Loxodonta africana ENSLAFG00000007405 N 0.000
UHMK1 Macaca mulatta ENSMMUG00000019513 N 0.000
UHMK1 Meleagris gallopavo ENSMGAG00000005043 N 0.000
XM_001363163.1 Monodelphis domestica ENSMODG00000001048 N 0.000
Uhmk1 Mus musculus ENSMUSG00000026667 N 0.000
UHMK1 Ochotona princeps ENSOPRG00000001881 N 0.000
D9ZBB1_RABIT Oryctolagus cuniculus ENSOCUG00000012411 N 0.000
UHMK1 Oryzias latipes ENSORLG00000014340 N 0.000
UHMK1 Otolemur garnettii ENSOGAG00000016110 N 0.000
UHMK1 Pan troglodytes ENSPTRG00000001601 N 0.000
ENSPPYG00000000582 Pongo pygmaeus ENSPPYG00000000582 N 0.000
UHMK1 Procavia capensis ENSPCAG00000000531 N 0.000
UHMK1 Pteropus vampyrus ENSPVAG00000002624 N 0.000
UHMK1 Spermophilus tridecemlineatus ENSSTOG00000004265 N 0.000
UHMK1 Taeniopygia guttata ENSTGUG00000017148 N 0.000
UHMK1 Tarsius syrichta ENSTSYG00000011273 N 0.000
UHMK1 Tupaia belangeri ENSTBEG00000017334 N 0.000
UHMK1 Vicugna pacos ENSVPAG00000010726 N 0.000