VDAG_06680 (Verticillium dahliae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDAG_06680 T31417_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_06680T0 RRM 9 77

Links

Other RRM family RBPs
Other Verticillium dahliae RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29801.m003152 Ricinus communis 29801.m003152 N 0.000
30170.m013847 Ricinus communis 30170.m013847 N 0.000
XM_002869128.1 Arabidopsis lyrata Al_scaffold_0007_654 N 0.000
PAB8 Arabidopsis thaliana AT1G49760-TAIR-G N 0.000
PAB2 Arabidopsis thaliana AT4G34110-TAIR-G N 0.000
BGIOSIBCE015822 Oryza indica BGIOSIBCE015822 N 0.000
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.000
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.000
BRADI3G20460 Brachypodium distachyon BRADI3G20460 N 0.000
BRADI4G08430 Brachypodium distachyon BRADI4G08430 N 0.000
BRADI5G14980 Brachypodium distachyon BRADI5G14980 N 0.000
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.000
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.000
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.000
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.000
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.000
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.000
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.000
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.000
e_gw1.24.89.1 Selaginella moellendorfii e_gw1.24.89.1 N 0.000
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.000
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.000
Glyma04g04300.1 Glycine max Glyma04g04300.1 N 0.000
Glyma06g04460.1 Glycine max Glyma06g04460.1 N 0.000
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.000
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.000
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.000
GRMZM2G013619 Zea mays GRMZM2G013619 N 0.000
GRMZM2G352129 Zea mays GRMZM2G352129 N 0.000
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.000
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.000
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.000
LjSGA_012037.1 Lotus japonicus LjSGA_012037.1 N 0.000
LOC_Os04g42600 Oryza sativa LOC_Os04g42600 N 0.000
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.000
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.000
MDP0000156895 Malus x domestica MDP0000156895 N 0.000
MDP0000212007 Malus x domestica MDP0000212007 N 0.000
MDP0000253709 Malus x domestica MDP0000253709 N 0.000
MDP0000283985 Malus x domestica MDP0000283985 N 0.000
MDP0000286821 Malus x domestica MDP0000286821 N 0.000
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.000
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.000
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.000
mgf004596m Mimulus guttatus mgf004596m N 0.000
mgf004973m Mimulus guttatus mgf004973m N 0.000
mgf005294m Mimulus guttatus mgf005294m N 0.000
mgf009542m Mimulus guttatus mgf009542m N 0.000
PK00659.1 Cannabis sativa PK00659.1 N 0.000
PK02172.1 Cannabis sativa PK02172.1 N 0.000
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.000
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.000
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.000
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.000
ppa002607m Prunus persica ppa002607m N 0.000
ppa002618m Prunus persica ppa002618m N 0.000
ppa002620m Prunus persica ppa002620m N 0.000
SB06G021850 Sorghum bicolor Sb06g021850 N 0.000
XM_002891485.1 Arabidopsis lyrata scaffold_104684.1 N 0.000
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.000