B7NZJ5_RABIT (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000007050 T39652_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000006100 RRM 155 223
ENSOCUP00000006100 RRM 252 322
ENSOCUP00000006100 RRM 445 502
ENSOCUP00000016263 RRM 156 224
ENSOCUP00000016263 RRM 253 323
ENSOCUP00000016263 RRM 446 503

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL006473 Aedes aegypti AAEL006473 I 0.000
AAH42354 Xenopus laevis AAH42354 I 0.000
AAI23123 Xenopus laevis AAI23123 I 0.000
AAI28932 Xenopus laevis AAI28932 I 0.000
AGAP010496 Anopheles gambiae AGAP010496 I 0.000
amel4_ncbi_hmm5595 Apis mellifera amel4_ncbi_hmm5595 I 0.000
Ame_R003447 Ailuropoda melanoleuca Ame_R003447 I 0.000
BGIBMGA013096 Bombyx mori BGIBMGA013096 I 0.000
CPIJ008786 Culex quinquefasciatus CPIJ008786 I 0.000
CpipJ_CPIJ008786 Culex pipiens CpipJ_CPIJ008786 I 0.000
DGIL_AUG5s14011g9t1 Acyrtosiphon pisum DGIL_AUG5s14011g9t1 I 0.000
SRSF1 Anolis carolinensis ENSACAG00000005542 I 0.000
SFRS1_BOVIN Bos taurus ENSBTAG00000014766 I 0.000
SRSF1 Canis familiaris ENSCAFG00000017430 I 0.000
SRSF1 Choloepus hoffmanni ENSCHOG00000001899 I 0.000
ENSCING00000007375 Ciona intestinalis ENSCING00000007375 I 0.000
LOC100400391 Callithrix jacchus ENSCJAG00000008111 I 0.000
LOC100392422 Callithrix jacchus ENSCJAG00000014041 I 0.000
LOC100392422 Callithrix jacchus ENSCJAG00000035311 I 0.000
SRSF1 Cavia porcellus ENSCPOG00000011760 I 0.000
ENSCSAVG00000006093 Ciona savignyi ENSCSAVG00000006093 I 0.000
srsf1a Danio rerio ENSDARG00000057691 I 0.000
LOC100056763 Equus caballus ENSECAG00000016654 I 0.000
SRSF1 Erinaceus europaeus ENSEEUG00000009255 I 0.000
SRSF1 Echinops telfairi ENSETEG00000005349 I 0.000
SRSF1 Homo sapiens ENSG00000136450 D 0.000
ENSGACG00000011094 Gasterosteus aculeatus ENSGACG00000011094 I 0.000
ENSGACG00000020621 Gasterosteus aculeatus ENSGACG00000020621 I 0.000
SRSF1 Gorilla gorilla ENSGGOG00000004386 I 0.000
SRSF1 Loxodonta africana ENSLAFG00000025743 I 0.000
SRSF1 Microcebus murinus ENSMICG00000013639 I 0.000
SRSF1 Myotis lucifugus ENSMLUG00000011040 I 0.000
ENSMMUG00000003260 Macaca mulatta ENSMMUG00000003260 I 0.000
SRSF1 Macaca mulatta ENSMMUG00000004725 I 0.000
SRSF1 Monodelphis domestica ENSMODG00000014781 I 0.000
Srsf1 Mus musculus ENSMUSG00000018379 I 0.000
ENSMUSG00000090049 Mus musculus ENSMUSG00000090049 I 0.000
ENSOCUG00000017678 Oryctolagus cuniculus ENSOCUG00000017678 I 0.000
ENSORLG00000004580 Oryzias latipes ENSORLG00000004580 I 0.000
SRSF1 Procavia capensis ENSPCAG00000005199 I 0.000
ENSPPYG00000008240 Pongo pygmaeus ENSPPYG00000008240 I 0.000
SRSF1 Pan troglodytes ENSPTRG00000009443 I 0.000
D4A9L2_RAT Rattus norvegicus ENSRNOG00000042643 I 0.000
SRSF1 Sorex araneus ENSSARG00000010949 I 0.000
SRSF1 Sus scrofa ENSSSCG00000017626 I 0.000
SRSF1 Spermophilus tridecemlineatus ENSSTOG00000000243 I 0.000
SRSF1 Tupaia belangeri ENSTBEG00000015378 I 0.000
SRSF1 Tetraodon nigroviridis ENSTNIG00000009993 I 0.000
ENSTNIG00000016223 Tetraodon nigroviridis ENSTNIG00000016223 I 0.000
ENSTRUG00000003691 Takifugu rubripes ENSTRUG00000003691 I 0.000
SRSF1 Takifugu rubripes ENSTRUG00000017058 I 0.000
SRSF1 Tarsius syrichta ENSTSYG00000013899 I 0.000
SRSF1 Vicugna pacos ENSVPAG00000010094 I 0.000
srsf1 Xenopus tropicalis ENSXETG00000008954 I 0.000
estExt_fgenesh2_pm.C_1180016 Branchiostoma floridae estExt_fgenesh2_pm.C_1180016 I 0.000
e_gw.425.15.1 Branchiostoma floridae e_gw.425.15.1 I 0.000
e_gw1.83.149.1 Daphnia pulex e_gw1.83.149.1 I 0.000
SF2 Drosophila melanogaster FBgn0040284 D 0.000
GA20008-RA Drosophila pseudoobscura FBgn0080004 I 0.000
GF16525 Drosophila ananassae FBgn0093546 I 0.000
GG20059 Drosophila erecta FBgn0112258 I 0.000
GH18077 Drosophila grimshawi FBgn0125545 I 0.000
GI24651 Drosophila mojavensis FBgn0147373 I 0.000
GM15444 Drosophila sechellia FBgn0170362 I 0.000
GJ23504 Drosophila virilis FBgn0210602 I 0.000
GK13511 Drosophila willistoni FBgn0215519 I 0.000
GE26323 Drosophila yakuba FBgn0243353 I 0.000
fgenesh1_pg.scaffold_37000136 Nematostella vectensis fgenesh1_pg.scaffold_37000136 I 0.000
fgenesh2_pg.scaffold_118000083 Branchiostoma floridae fgenesh2_pg.scaffold_118000083 I 0.000
gw.425.18.1 Branchiostoma floridae gw.425.18.1 I 0.000
gw1.25.268.1 Lottia gigantea gw1.25.268.1 I 0.000
ISCW014398 Ixodes scapularis ISCW014398 I 0.000
LOAG_10275 Loa loa LOAG_10275 I 0.000
Minc04015 Meloidogyne incognita Minc04015 I 0.000
Minc06188 Meloidogyne incognita Minc06188 I 0.000
nasonia_NCBI_hmm519234 Nasonia vitripennis nasonia_NCBI_hmm519234 I 0.000
Ppa-rsp-3 Pristionchus pacificus PPA25378 I 0.000
Sjc_0030490 Schistosoma japonicum Sjc_0030490 I 0.000
Smp_185230 Schistosoma mansoni Smp_185230 I 0.000