GRMZM2G472052 (Zea mays)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GRMZM2G472052 T21391_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G472052_P01 KH 144 214
GRMZM2G472052_P02 KH 144 215
GRMZM2G472052_P03 KH 94 172

Links

Other KH family RBPs
Other Zea mays RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa009701m Prunus persica ppa009701m N 0.816
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.829
mgf005196m Mimulus guttatus mgf005196m N 0.789
mgf011994m Mimulus guttatus mgf011994m N 0.859
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.741
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.958
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.807
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.741
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.863
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.783
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.849
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.827
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.728
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.763
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.831
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.816
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.787
Glyma12g28690.1 Glycine max Glyma12g28690.1 N 0.718
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.763
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.795
MDP0000119110 Malus x domestica MDP0000119110 N 0.836
MDP0000186494 Malus x domestica MDP0000186494 N 0.838
MDP0000268130 Malus x domestica MDP0000268130 N 0.746
MDP0000300654 Malus x domestica MDP0000300654 N 0.753
MDP0000501473 Malus x domestica MDP0000501473 N 0.836
MDP0000665847 Malus x domestica MDP0000665847 N 0.838
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.813
ppa009432m Prunus persica ppa009432m N 0.765
MDP0000077753 Malus x domestica MDP0000077753 N 0.746
MDP0000077749 Malus x domestica MDP0000077749 N 0.765
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.763
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.785
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.789
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.863
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.863
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.816
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.775
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.816
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.803
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.836
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.789
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.786
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.776
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.785
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.718
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.861
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.802
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.849
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.765
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.914
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.886
PK22673.1 Cannabis sativa PK22673.1 N 0.803
PK23097.1 Cannabis sativa PK23097.1 N 0.849
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.785
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.816
BGIOSIBCE004076 Oryza indica BGIOSIBCE004076 N 0.708
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.822
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.765
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.864
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.852
B9N0F3_POPTR Populus trichocarpa POPTR_0004s23460 N 0.741
SB09G023640 Sorghum bicolor Sb09g023640 N 0.795
27955.m000377 Ricinus communis 27955.m000377 N 0.827
29765.m000727 Ricinus communis 29765.m000727 N 0.733
29945.m000086 Ricinus communis 29945.m000086 N 0.789
cassava13308.valid.m1 Manihot esculenta cassava13308.valid.m1 N 0.762
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 0.762
cassava15324.m1 Manihot esculenta cassava15324.m1 N 0.762
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.847
SB09G020640 Sorghum bicolor Sb09g020640 N 0.716
SB03G038070 Sorghum bicolor Sb03g038070 N 0.741
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.816
A9PGC0_POPTR Populus trichocarpa POPTR_0011s17110 N 0.718
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.775
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.812
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.833
A9PGS1_POPTR Populus trichocarpa POPTR_0022s00450 N 0.744
SB01G003680 Sorghum bicolor Sb01g003680 N 0.877
SB02G006770 Sorghum bicolor Sb02g006770 N 1.000
PK01720.1 Cannabis sativa PK01720.1 N 0.718