ENSMODG00000017748 (Monodelphis domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMODG00000017748 T19104_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.915
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.872
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.862
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.862
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.809
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000022130 KH 18 74
ENSMODP00000022130 KH 98 161
ENSMODP00000022130 KH 244 306
ENSMODP00000036120 KH 100 162

Links

Other KH family RBPs
Other Monodelphis domestica RBPs

108 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.000
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.851
AAH41241 Xenopus laevis AAH41241 I 0.899
AAH84195 Xenopus laevis AAH84195 I 0.899
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.000
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.862
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.746
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.843
CAB50743 Xenopus laevis CAB50743 I 0.899
CAD29864 Xenopus laevis CAD29864 I 0.899
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.750
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.799
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.000
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.915
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.809
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.910
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.915
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.716
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.851
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.862
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.915
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.751
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.786
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.915
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.725
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.915
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.872
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.867
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.750
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.915
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.862
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.000
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.794
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.872
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.854
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.705
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.000
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.000
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.000
ISCW016289 Ixodes scapularis ISCW016289 I 0.000
LOC100050101 Equus caballus ENSECAG00000012413 I 0.809
LOC100050579 Equus caballus ENSECAG00000002544 I 0.862
LOC100060660 Equus caballus ENSECAG00000024218 I 0.000
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.910
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.825
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.862
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.000
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.000
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.862
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.867
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.862
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.862
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.862
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.729
PCBP1 Homo sapiens ENSG00000169564 D 0.862
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.830
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.862
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.862
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.835
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.862
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.862
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.915
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.915
PCBP2 Equus caballus ENSECAG00000022389 I 0.915
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.915
PCBP2 Homo sapiens ENSG00000197111 D 0.915
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.915
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.915
pcbp2 Danio rerio ENSDARG00000013184 D 0.872
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.915
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.915
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.897
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.984
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.757
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.809
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.915
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.919
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.771
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.915
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.830
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.915
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.809
PCBP3 Felis catus ENSFCAG00000014812 I 0.703
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.000
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.809
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.809
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.757
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.000
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.798
pcbp3 Danio rerio ENSDARG00000054378 I 0.741
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.798
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.703
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.741
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.809
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.899
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.809
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.800
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.809
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.000
PCBP3 Procavia capensis ENSPCAG00000001454 I 0.000
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.809
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.798
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.766
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.798
PCBP3 Homo sapiens ENSG00000183570 I 0.825
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.767
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.759
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.735
PCBP3 Gallus gallus ENSGALG00000004394 I 0.771
PCBP3 Gallus gallus ENSGALG00000013155 I 0.814
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.809
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.809
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.814
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.000
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.000
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.000
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.000
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.000
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.000
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.000
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.000
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.000
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.000
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.000
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.000
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.000
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.000
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.000
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.000
PCBP4 Homo sapiens ENSG00000090097 I 0.000
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.000
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.798
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.915