APUM1 (Arabidopsis thaliana)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 AT2G29200-TAIR-G T24020_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT2G29200.1-P PUF 630 664
AT2G29200.1-P PUF 666 700
AT2G29200.1-P PUF 702 736
AT2G29200.1-P PUF 738 772
AT2G29200.1-P PUF 774 809
AT2G29200.1-P PUF 816 844
AT2G29200.1-P PUF 847 881
AT2G29200.1-P PUF 894 923

Links

Other PUF family RBPs
Other Arabidopsis thaliana RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
20338_Multiple Saccharomyces mikatae 20338_Multiple N 0.000
20661_YOR091W Saccharomyces paradoxus 20661_YOR091W N 0.000
22901_YOR091W Saccharomyces bayanus 22901_YOR091W N 0.000
72073 Helobdella robusta 72073 N 0.000
A7TLF2_VANPO Vanderwaltozyma polyspora A7TLF2_VANPO N 0.000
AB07703.1 Alternaria brassicicola AB07703.1 N 0.000
ACLA_016930 Aspergillus clavatus CADACLAG00000891 N 0.000
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.000
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.000
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.000
BDBG_01641 Blastomyces dermatitidis BDBG_01641 N 0.000
BGIBMGA011604 Bombyx mori BGIBMGA011604 N 0.000
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.000
CC1G_07829 Coprinopsis cinerea CC1G_07829 N 0.000
DGIL_AUG5s16g7t1 Acyrtosiphon pisum DGIL_AUG5s16g7t1 N 0.000
ENSCING00000006888 Ciona intestinalis ENSCING00000006888 N 0.000
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.000
estExt_fgenesh1_pm.C_180201 Phytophthora capsici estExt_fgenesh1_pm.C_180201 N 0.000
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.000
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.000
estExt_Genewise1.C_30385 Mucor circinelloides estExt_Genewise1.C_30385 N 0.000
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.000
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.000
e_gw1.19.91.1 Melampsora laricis populina e_gw1.19.91.1 N 0.000
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.000
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.000
fgenesh1_pg.C_scaffold_3139000003 Phytophthora capsici fgenesh1_pg.C_scaffold_3139000003 N 0.000
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.000
HCAG_08348 Histoplasma capsulatum HCAG_08348 N 0.000
KLLA0C13673g Kluyveromyces lactis KLLA0C13673g N 0.000
KLTH0G08162g Kluyveromyces thermotolerans KLTH0G08162g N 0.000
Kwal_2969 Kluyveromyces waltii Kwal_2969 N 0.000
MCYG_02954 Microsporum canis MCYG_02954 N 0.000
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.000
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.000
NCU01795 Neurospora crassa NCU01795 N 0.000
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.000
PASA_GEN_1200032 Daphnia pulex PASA_GEN_1200032 N 0.000
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.000
PGTG_08922 Puccinia graminis PGTG_08922 N 0.000
PITG_04608 Phytophthora infestans PITG_04608 N 0.000
SAKL0E09966g Lachancea kluyveri SAKL0E09966g N 0.000
Scas_Contig578.9 Saccharomyces castellii Scas_Contig578.9 N 0.000
SPPG_00188 Spizellomyces punctatus SPPG_00188 N 0.000
s_451242 Phytophthora sojae s_451242 N 0.000
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.000
TERG_01412 Trichophyton rubrum TERG_01412 N 0.000
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.000
TMA46 Saccharomyces cerevisiae YOR091W N 0.000
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.000
ZC3H15 Gasterosteus aculeatus ENSGACG00000011648 N 0.000
zc3h15 Danio rerio ENSDARG00000015889 N 0.000
ZC3H15 Oryzias latipes ENSORLG00000018606 N 0.000
ZC3H15 Takifugu rubripes ENSTRUG00000004988 N 0.000
ZYRO0C15598g Zygosaccharomyces rouxii ZYRO0C15598g N 0.000