PTTG_05198 (Puccinia triticina)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PTTG_05198 T08381_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTTG_05198T0 CCHC ZF 292 309

Links

Other CCHC ZF family RBPs
Other Puccinia triticina RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.000
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.000
PK05232.1 Cannabis sativa PK05232.1 N 0.000
PK15963.1 Cannabis sativa PK15963.1 N 0.000
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.000
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.000
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.000
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.000
Glyma10g41320.1 Glycine max Glyma10g41320.1 N 0.000
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.000
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.000
MDP0000304811 Malus x domestica MDP0000304811 N 0.000
cassava35282.valid.m1 Manihot esculenta cassava35282.valid.m1 N 0.000
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.000
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.000
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.000
Medtr8g088990 Medicago truncatula Medtr8g088990 N 0.000
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.000
mgf011871m Mimulus guttatus mgf011871m N 0.000
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 0.000
LOC_Os08g29650 Oryza sativa LOC_Os08g29650 N 0.000
PDK_20s1771821g002 Phoenix dactylifera PDK_20s1771821g002 N 0.000
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.000
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.000
gw1.3.275.1 Physcomitrella patens gw1.3.275.1 N 0.000
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.000
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.000
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.000
ppa010685m Prunus persica ppa010685m N 0.000
ppa011480m Prunus persica ppa011480m N 0.000
29784.m000370 Ricinus communis 29784.m000370 N 0.000
29751.m001798 Ricinus communis 29751.m001798 N 0.000
30190.m011248 Ricinus communis 30190.m011248 N 0.000
gw1.20.902.1 Selaginella moellendorfii gw1.20.902.1 N 0.000
e_gw1.3.92.1 Selaginella moellendorfii e_gw1.3.92.1 N 0.000
gw1.19.297.1 Selaginella moellendorfii gw1.19.297.1 N 0.000
e_gw1.25.252.1 Selaginella moellendorfii e_gw1.25.252.1 N 0.000
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.000
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.000