FUBP1 (Homo sapiens)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSG00000162613 T18805_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.774
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.774
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.774
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.774
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000294623 KH 102 164
ENSP00000294623 KH 187 251
ENSP00000294623 KH 277 339
ENSP00000294623 KH 378 443
ENSP00000359803 KH 102 164
ENSP00000359803 KH 187 251
ENSP00000359803 KH 277 339
ENSP00000359803 KH 378 443
ENSP00000359804 KH 102 164
ENSP00000359804 KH 187 251
ENSP00000359804 KH 277 339
ENSP00000359804 KH 378 443
ENSP00000359809 KH 101 163
ENSP00000359809 KH 186 250
ENSP00000359809 KH 276 338
ENSP00000359809 KH 377 442
ENSP00000378380 KH 102 164
ENSP00000378380 KH 187 251
ENSP00000378380 KH 277 339
ENSP00000378380 KH 378 443
ENSP00000389536 KH 123 185
ENSP00000389536 KH 208 272
ENSP00000389536 KH 298 360
ENSP00000389536 KH 399 464
ENSP00000402630 KH 122 184
ENSP00000402630 KH 207 232

Links

Other KH family RBPs
Other Homo sapiens RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Genemark.9654_g Serpula lacrymans Genemark.9654_g N 0.000
Genemark.697_g Serpula lacrymans Genemark.697_g N 0.000
Genemark.4875_g Serpula lacrymans Genemark.4875_g N 0.000
Genemark.4852_g Serpula lacrymans Genemark.4852_g N 0.000
Genemark.4804_g Serpula lacrymans Genemark.4804_g N 0.000
Genemark.4784_g Serpula lacrymans Genemark.4784_g N 0.000
Genemark.4605_g Serpula lacrymans Genemark.4605_g N 0.000
Genemark.4171_g Serpula lacrymans Genemark.4171_g N 0.000
Genemark.398_g Serpula lacrymans Genemark.398_g N 0.000
Genemark.383_g Serpula lacrymans Genemark.383_g N 0.000
Genemark.3177_g Serpula lacrymans Genemark.3177_g N 0.000
Genemark.291_g Serpula lacrymans Genemark.291_g N 0.000
Genemark.7181_g Serpula lacrymans Genemark.7181_g N 0.000
Genemark.7317_g Serpula lacrymans Genemark.7317_g N 0.000
Genemark.9644_g Serpula lacrymans Genemark.9644_g N 0.000
Genemark.9611_g Serpula lacrymans Genemark.9611_g N 0.000
Genemark.948_g Serpula lacrymans Genemark.948_g N 0.000
Genemark.920_g Serpula lacrymans Genemark.920_g N 0.000
Genemark.9154_g Serpula lacrymans Genemark.9154_g N 0.000
Genemark.8882_g Serpula lacrymans Genemark.8882_g N 0.000
Genemark.8764_g Serpula lacrymans Genemark.8764_g N 0.000
Genemark.8722_g Serpula lacrymans Genemark.8722_g N 0.000
Genemark.8452_g Serpula lacrymans Genemark.8452_g N 0.000
Genemark.8449_g Serpula lacrymans Genemark.8449_g N 0.000
Genemark.7905_g Serpula lacrymans Genemark.7905_g N 0.000
Genemark.2894_g Serpula lacrymans Genemark.2894_g N 0.000
Genemark.2836_g Serpula lacrymans Genemark.2836_g N 0.000
Genemark.11883_g Serpula lacrymans Genemark.11883_g N 0.000
Genemark.11784_g Serpula lacrymans Genemark.11784_g N 0.000
Genemark.11728_g Serpula lacrymans Genemark.11728_g N 0.000
Genemark.114_g Serpula lacrymans Genemark.114_g N 0.000
Genemark.10994_g Serpula lacrymans Genemark.10994_g N 0.000
Genemark.10663_g Serpula lacrymans Genemark.10663_g N 0.000
Genemark.10659_g Serpula lacrymans Genemark.10659_g N 0.000
Genemark.10616_g Serpula lacrymans Genemark.10616_g N 0.000
Genemark.10542_g Serpula lacrymans Genemark.10542_g N 0.000
Genemark.10431_g Serpula lacrymans Genemark.10431_g N 0.000
Genemark.10428_g Serpula lacrymans Genemark.10428_g N 0.000
Genemark.12078_g Serpula lacrymans Genemark.12078_g N 0.000
Genemark.12100_g Serpula lacrymans Genemark.12100_g N 0.000
Genemark.2815_g Serpula lacrymans Genemark.2815_g N 0.000
Genemark.2746_g Serpula lacrymans Genemark.2746_g N 0.000
Genemark.2704_g Serpula lacrymans Genemark.2704_g N 0.000
Genemark.2433_g Serpula lacrymans Genemark.2433_g N 0.000
Genemark.1932_g Serpula lacrymans Genemark.1932_g N 0.000
Genemark.1916_g Serpula lacrymans Genemark.1916_g N 0.000
Genemark.1711_g Serpula lacrymans Genemark.1711_g N 0.000
Genemark.12634_g Serpula lacrymans Genemark.12634_g N 0.000
Genemark.12630_g Serpula lacrymans Genemark.12630_g N 0.000
Genemark.12220_g Serpula lacrymans Genemark.12220_g N 0.000
Genemark.12122_g Serpula lacrymans Genemark.12122_g N 0.000
Genemark.10134_g Serpula lacrymans Genemark.10134_g N 0.000