PABPN1 (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000014747 T38920_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000019357 RRM 172 241

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.000
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.000
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.000
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.000
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.000
PK05280.1 Cannabis sativa PK05280.1 N 0.000
PK28733.1 Cannabis sativa PK28733.1 N 0.000
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.000
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.000
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.000
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.000
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.000
MDP0000218595 Malus x domestica MDP0000218595 N 0.000
MDP0000224531 Malus x domestica MDP0000224531 N 0.000
MDP0000299693 Malus x domestica MDP0000299693 N 0.000
MDP0000528470 Malus x domestica MDP0000528470 N 0.000
MDP0000919119 Malus x domestica MDP0000919119 N 0.000
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.000
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.000
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.000
mgf009747m Mimulus guttatus mgf009747m N 0.000
mgf008267m Mimulus guttatus mgf008267m N 0.000
mgf001484m Mimulus guttatus mgf001484m N 0.000
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.000
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.000
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.000
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.000
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.000
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.000
ppa008913m Prunus persica ppa008913m N 0.000
ppa009286m Prunus persica ppa009286m N 0.000
30147.m013835 Ricinus communis 30147.m013835 N 0.000
SB02G011330 Sorghum bicolor Sb02g011330 N 0.000
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.000
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.000
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.000
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.000