NCBP2 (Vicugna pacos)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSVPAG00000010369 T42796_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000009648 RRM 16 86

Links

Other RRM family RBPs
Other Vicugna pacos RBPs

153 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.746
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.775
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.803
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.986
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.732
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.732
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.803
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.831
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.873
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.718
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.718
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.704
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.718
An12g03930 Aspergillus niger CADANGAG00009835 N 0.704
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.704
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.817
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.986
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.704
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.746
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.831
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.831
Bm1_02935 Brugia malayi Bm1_02935 N 0.789
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.986
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.732
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.986
PK11911.1 Cannabis sativa PK11911.1 N 0.732
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.746
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.958
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.718
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.972
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.789
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.789
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.761
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.718
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.704
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.746
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.789
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.789
ncbp2 Danio rerio ENSDARG00000014898 N 0.831
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.746
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.704
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.704
GF16759 Drosophila ananassae FBgn0093780 N 0.775
GG22670 Drosophila erecta FBgn0114835 N 0.775
GH15101 Drosophila grimshawi FBgn0122576 N 0.775
Cbp20 Drosophila melanogaster FBgn0022943 N 0.761
GI23717 Drosophila mojavensis FBgn0146442 N 0.775
GL12592 Drosophila persimilis FBgn0150198 N 0.761
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.761
GM15280 Drosophila sechellia FBgn0170200 N 0.761
GD19204 Drosophila simulans FBgn0190709 N 0.761
GJ18756 Drosophila virilis FBgn0205908 N 0.746
GJ23276 Drosophila virilis FBgn0210378 N 0.775
GK11244 Drosophila willistoni FBgn0213255 N 0.761
GE25514 Drosophila yakuba FBgn0242580 N 0.761
NCBP2 Equus caballus ENSECAG00000016153 N 0.986
NCBP2L Equus caballus ENSECAG00000003478 N 0.746
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.718
NCBP2 Gallus gallus ENSGALG00000006843 N 0.915
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.831
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.789
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.732
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.746
91084 Helobdella robusta 91084 N 0.789
NCBP2 Homo sapiens ENSG00000114503 N 0.986
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.817
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.845
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.817
LOAG_03270 Loa loa LOAG_03270 N 0.803
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.817
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.732
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.972
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.803
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.986
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.958
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.958
MDP0000315402 Malus x domestica MDP0000315402 N 0.732
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.746
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.746
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.704
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.831
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.915
Minc02990 Meloidogyne incognita Minc02990 N 0.718
Minc06129 Meloidogyne incognita Minc06129 N 0.718
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.986
mgf009822m Mimulus guttatus mgf009822m N 0.704
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.930
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.930
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.930
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.958
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.718
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.986
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.704
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.986
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.887
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.845
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.718
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.803
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.718
NCU00210 Neurospora crassa NCU00210 N 0.704
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.704
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.958
SNAPOd2T00014922001 Oikopleura dioica SNAPOd2T00014922001 N 0.704
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.958
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.972
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.732
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.817
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.986
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.986
PHUM535920 Pediculus humanus PHUM535920 N 0.845
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.704
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.704
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.761
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.732
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.732
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.986
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.718
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.718
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.944
ppa010346m Prunus persica ppa010346m N 0.732
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.972
PGTG_01720 Puccinia graminis PGTG_01720 N 0.704
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.986
29983.m003140 Ricinus communis 29983.m003140 N 0.718
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.718
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.704
NCBP2 Sorex araneus ENSSARG00000014294 N 0.873
SB04G025800 Sorghum bicolor Sb04g025800 N 0.761
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.972
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.761
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.732
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.732
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.746
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.986
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.986
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.845
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.901
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.859
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.845
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.732
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.718
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.704
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.986
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.972
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.746
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.803
2118330B Xenopus laevis 2118330B N 0.845
AAH72902 Xenopus laevis AAH72902 N 0.859
CAA59259 Xenopus laevis CAA59259 N 0.845
P52299 Xenopus laevis P52299 N 0.859
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.873
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.761