PK00601.1 (Cannabis sativa)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 PK00601.1 T23976_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK00601.1 PUF 728 762
PK00601.1 PUF 764 798
PK00601.1 PUF 800 834
PK00601.1 PUF 837 870
PK00601.1 PUF 872 907
PK00601.1 PUF 909 943
PK00601.1 PUF 945 979
PK00601.1 PUF 992 1021

Links

Other PUF family RBPs
Other Cannabis sativa RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Hrb27C Drosophila melanogaster FBgn0004838 D 0.000
CpipJ_CPIJ015262 Culex pipiens CpipJ_CPIJ015262 I 0.000
GH13720 Drosophila grimshawi FBgn0121196 I 0.000
GI24040 Drosophila mojavensis FBgn0146763 I 0.000
GL26194 Drosophila persimilis FBgn0163776 I 0.000
GJ21323 Drosophila virilis FBgn0208454 I 0.000
GK24781 Drosophila willistoni FBgn0226741 I 0.000
GE14209 Drosophila yakuba FBgn0231830 I 0.000
PHUM115070 Pediculus humanus PHUM115070 I 0.000
GG10443 Drosophila erecta FBgn0102752 I 0.000
GF15435 Drosophila ananassae FBgn0092460 I 0.000
Hrb27C Drosophila simulans FBgn0083432 I 0.000
GA10287-RA Drosophila pseudoobscura FBgn0070345 I 0.000
CPIJ015262 Culex quinquefasciatus CPIJ015262 I 0.000
AGAP001930 Anopheles gambiae AGAP001930 I 0.000
AAEL008257 Aedes aegypti AAEL008257 I 0.000
nasonia_NCBI_hmm120503 Nasonia vitripennis nasonia_NCBI_hmm120503 I 0.000
DGIL_AUG5s520g11t1 Acyrtosiphon pisum DGIL_AUG5s520g11t1 I 0.000
amel4_ncbi_hmm9281 Apis mellifera amel4_ncbi_hmm9281 I 0.000
estExt_fgenesh1_pg.C_230134 Daphnia pulex estExt_fgenesh1_pg.C_230134 I 0.000