cassava10774.m1 (Manihot esculenta)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 cassava10774.m1 T24691_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava10774.m1 PUF 449 483
cassava10774.m1 PUF 485 519
cassava10774.m1 PUF 521 555
cassava10774.m1 PUF 557 591
cassava10774.m1 PUF 593 627
cassava10774.m1 PUF 631 663
cassava10774.m1 PUF 666 700
cassava10774.m1 PUF 713 742

Links

Other PUF family RBPs
Other Manihot esculenta RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL008257 Aedes aegypti AAEL008257 I 0.000
AGAP001930 Anopheles gambiae AGAP001930 I 0.000
amel4_ncbi_hmm9281 Apis mellifera amel4_ncbi_hmm9281 I 0.000
CPIJ015262 Culex quinquefasciatus CPIJ015262 I 0.000
CpipJ_CPIJ015262 Culex pipiens CpipJ_CPIJ015262 I 0.000
DGIL_AUG5s520g11t1 Acyrtosiphon pisum DGIL_AUG5s520g11t1 I 0.000
estExt_fgenesh1_pg.C_230134 Daphnia pulex estExt_fgenesh1_pg.C_230134 I 0.000
GA10287-RA Drosophila pseudoobscura FBgn0070345 I 0.000
GE14209 Drosophila yakuba FBgn0231830 I 0.000
GF15435 Drosophila ananassae FBgn0092460 I 0.000
GG10443 Drosophila erecta FBgn0102752 I 0.000
GI24040 Drosophila mojavensis FBgn0146763 I 0.000
GJ21323 Drosophila virilis FBgn0208454 I 0.000
GK24781 Drosophila willistoni FBgn0226741 I 0.000
GL26194 Drosophila persimilis FBgn0163776 I 0.000
GM16252 Drosophila sechellia FBgn0171168 I 0.000
Hrb27C Drosophila simulans FBgn0083432 I 0.000
Hrb27C Drosophila melanogaster FBgn0004838 D 0.000
nasonia_NCBI_hmm120503 Nasonia vitripennis nasonia_NCBI_hmm120503 I 0.000
PHUM115070 Pediculus humanus PHUM115070 I 0.000