CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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mgf015734m
(
Mimulus guttatus
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
mgf015734m
T24930_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf015734m
PUF
643
677
EIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVF
mgf015734m
PUF
679
712
EIFPQALNLMTDVFGNYVIQKFFEHGMASQRREL
mgf015734m
PUF
715
749
KLIGHVLTLSLQMYGCRVIQKAIEVVDVDQKINMV
mgf015734m
PUF
751
785
ELDGHVMRCVRDQNGNHVIQKCIESVPEDHIQFIV
mgf015734m
PUF
787
819
TFFDQVVTLSTHPYGCRVIQRVLEYCKDENTQS
mgf015734m
PUF
824
858
EILGSVSMLAQDQYGNYVVQHVLEHGKPHERTTII
mgf015734m
PUF
860
894
ELAGKIVQMSQQKFASNVVEKCLTFGDPSERQLLV
mgf015734m
PUF
907
936
LQAMMKDQFANYVVQKVLETCSDQERELIM
Links
Other
PUF
family RBPs
Other
Mimulus guttatus
RBPs
78 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LbrM23_V2.0670
Leishmania braziliensis
LbrM23_V2.0670
N
0.000
LinJ23_V3.0680
Leishmania infantum
LinJ23_V3.0680
N
0.000
LmjF23.1650
Leishmania major
LmjF23.1650
N
0.000