MDP0000319167 (Malus x domestica)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 MDP0000319167 T25206_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000319167 PUF 788 822
MDP0000319167 PUF 825 858
MDP0000319167 PUF 860 894
MDP0000319167 PUF 896 930
MDP0000319167 PUF 932 964
MDP0000319167 PUF 969 1003
MDP0000319167 PUF 1005 1039
MDP0000319167 PUF 1052 1081

Links

Other PUF family RBPs
Other Malus x domestica RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44002 Xenopus laevis AAH44002 I 0.000
Ame_R015210 Ailuropoda melanoleuca Ame_R015210 I 0.000
ENSPPYG00000018753 Pongo pygmaeus ENSPPYG00000018753 I 0.000
ESRP1 Anolis carolinensis ENSACAG00000003748 I 0.000
Esrp1 Mus musculus ENSMUSG00000040728 I 0.000
ESRP1 Ornithorhynchus anatinus ENSOANG00000004746 I 0.000
ESRP1 Oryctolagus cuniculus ENSOCUG00000001316 I 0.000
ESRP1 Pan troglodytes ENSPTRG00000020430 I 0.000
ESRP1 Pteropus vampyrus ENSPVAG00000014513 I 0.000
ESRP1 Sus scrofa ENSSSCG00000006099 I 0.000
ESRP1 Tarsius syrichta ENSTSYG00000006036 I 0.000
ESRP1 Tursiops truncatus ENSTTRG00000004226 I 0.000
ESRP1 Vicugna pacos ENSVPAG00000006566 I 0.000
esrp1 Xenopus tropicalis ENSXETG00000014667 I 0.000
ESRP1 Monodelphis domestica ENSMODG00000007268 I 0.000
ESRP1 Macaca mulatta ENSMMUG00000021112 I 0.000
ESRP1 Canis familiaris ENSCAFG00000009305 I 0.000
ESRP1 Cavia porcellus ENSCPOG00000012197 I 0.000
ESRP1 Equus caballus ENSECAG00000000784 I 0.000
ESRP1 Erinaceus europaeus ENSEEUG00000001673 I 0.000
ESRP1 Felis catus ENSFCAG00000009920 I 0.000
ESRP1 Homo sapiens ENSG00000104413 I 0.000
ESRP1 Meleagris gallopavo ENSMGAG00000012042 I 0.000
ESRP1 Microcebus murinus ENSMICG00000008757 I 0.000
ESRP1 Gorilla gorilla ENSGGOG00000003627 I 0.000
ESRP1 Loxodonta africana ENSLAFG00000001498 I 0.000
LOC100386717 Callithrix jacchus ENSCJAG00000000043 I 0.000
LOC788414 Bos taurus ENSBTAG00000021838 I 0.000
Q7ZY29 Xenopus laevis Q7ZY29 I 0.000
RBM35A Taeniopygia guttata ENSTGUG00000011907 I 0.000
RBM35A Gallus gallus ENSGALG00000015968 I 0.000
RGD1560481 Rattus norvegicus ENSRNOG00000008184 I 0.000