Ame_R015370 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Ame_R015370 T55620_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.762
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.762
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.762
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.742
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R015370 RRM 8 80
Ame_R015370 RRM 102 171

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

190 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.772
HNRNPA1 Homo sapiens ENSG00000135486 D 0.793
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.800
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.772
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.000
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.000
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.772
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.793
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.793
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.793
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.772
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.779
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.786
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.733
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.766
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.779
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.000
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.793
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.779
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.779
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.800
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.772
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.781
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.000
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.793
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.721
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.779
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.786
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.793
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.000
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.793
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.793
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.793
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.779
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.793
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.793
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.719
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.747
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.793
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.766
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.793
AAA49741 Xenopus laevis AAA49741 I 0.745
AAA49742 Xenopus laevis AAA49742 I 0.745
AAH45260 Xenopus laevis AAH45260 I 0.759
AAH72090 Xenopus laevis AAH72090 I 0.759
CBF67555 Xenopus laevis CBF67555 I 0.745
CBF67672 Xenopus laevis CBF67672 I 0.759
CBU92428 Xenopus laevis CBU92428 I 0.745
CBU92546 Xenopus laevis CBU92546 I 0.759
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.717
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.759
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.793
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.772
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.000
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.786
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.000
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.759
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.793
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.793
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.793
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.793
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.793
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.759
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.745
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.733
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.759
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.741
P17130 Xenopus laevis P17130 I 0.745
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.793
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.800
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.752
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.703
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.000
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.000
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.000
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.000
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.779
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.721
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.000
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.000
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.714
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.000
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.000
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.000
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.000
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.000
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.733
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.793
LOC785445 Bos taurus ENSBTAG00000025621 I 0.753
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.000
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.000
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.000
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.719
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.000
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.000
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.000
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.714
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.752
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.000
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.000
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.745
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.793
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.000
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.701
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.709
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.793
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.705
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.772
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.766
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.745
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.793
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.726
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.779
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.793
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.717
LOC100054206 Equus caballus ENSECAG00000006699 I 0.714
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.793
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.752
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.779
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.793
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.719
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.726
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.701
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.000
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.772
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.000
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.000
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.719
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.719
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.721
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.772
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.786
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.740
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.000
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.772
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.745
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.733
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.793