SRSF5 (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000011362 T39137_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.736
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.736
SRSF5
M355_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
983_9037021 		0.729
SRSF5
M357_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
985_9037021 		0.729
SRSF5
M356_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
984_9037021 		0.729
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000014208 RRM 6 68
ENSMODP00000014208 RRM 110 175

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

137 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK10508.1 Cannabis sativa PK10508.1 N 0.000
Glyma11g13490.1 Glycine max Glyma11g13490.1 N 0.000
Glyma12g05490.1 Glycine max Glyma12g05490.1 N 0.000
MDP0000252655 Malus x domestica MDP0000252655 N 0.000
MDP0000252696 Malus x domestica MDP0000252696 N 0.000
Medtr4g092490 Medicago truncatula Medtr4g092490 N 0.000
ppa000835m Prunus persica ppa000835m N 0.000
29577.m000447 Ricinus communis 29577.m000447 N 0.000