CELF3 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000006618 T41429_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.810
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.800
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000007057 RRM 13 79
ENSSSCP00000007057 RRM 98 166
ENSSSCP00000007057 RRM 382 452

Links

Other RRM family RBPs
Other Sus scrofa RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R015631 Ailuropoda melanoleuca Ame_R015631 N 0.000
KIAA0430 Anolis carolinensis ENSACAG00000003689 N 0.000
LOC506615 Bos taurus ENSBTAG00000020387 N 0.000
LOC100389469 Callithrix jacchus ENSCJAG00000005426 N 0.000
KIAA0430 Canis familiaris ENSCAFG00000018732 N 0.000
KIAA0430 Cavia porcellus ENSCPOG00000008677 N 0.000
KIAA0430 Choloepus hoffmanni ENSCHOG00000000497 N 0.000
LOC100050501 Equus caballus ENSECAG00000013828 N 0.000
KIAA0430 Erinaceus europaeus ENSEEUG00000004084 N 0.000
KIAA0430 Felis catus ENSFCAG00000013229 N 0.000
KIAA0430 Gallus gallus ENSGALG00000006475 N 0.000
KIAA0430 Gorilla gorilla ENSGGOG00000008946 N 0.000
KIAA0430 Homo sapiens ENSG00000166783 N 0.000
KIAA0430 Loxodonta africana ENSLAFG00000017524 N 0.000
KIAA0430 Macaca mulatta ENSMMUG00000018035 N 0.000
KIAA0430 Macropus eugenii ENSMEUG00000005341 N 0.000
KIAA0430 Meleagris gallopavo ENSMGAG00000006956 N 0.000
4921513D23Rik Mus musculus ENSMUSG00000060657 N 0.000
KIAA0430 Myotis lucifugus ENSMLUG00000004374 N 0.000
KIAA0430 Ornithorhynchus anatinus ENSOANG00000005140 N 0.000
KIAA0430 Oryctolagus cuniculus ENSOCUG00000003687 N 0.000
KIAA0430 Otolemur garnettii ENSOGAG00000003694 N 0.000
KIAA0430 Pan troglodytes ENSPTRG00000007807 N 0.000
ENSPPYG00000007131 Pongo pygmaeus ENSPPYG00000007131 N 0.000
KIAA0430 Pteropus vampyrus ENSPVAG00000004572 N 0.000
Lkap Rattus norvegicus ENSRNOG00000002314 N 0.000
KIAA0430 Taeniopygia guttata ENSTGUG00000005331 N 0.000
KIAA0430 Tarsius syrichta ENSTSYG00000013474 N 0.000
KIAA0430 Tursiops truncatus ENSTTRG00000010245 N 0.000
KIAA0430 Vicugna pacos ENSVPAG00000010903 N 0.000