Glyma02g07920.1 (Glycine max)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 Glyma02g07920.1 T62392_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma02g07920.1 YTH 357 447

Links

Other YTH family RBPs
Other Glycine max RBPs

86 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr6g030790 Medicago truncatula Medtr6g030790 N 0.901
Medtr6g030800 Medicago truncatula Medtr6g030800 N 0.901
Glyma19g28710.1 Glycine max Glyma19g28710.1 N 0.879
Medtr7g100450 Medicago truncatula Medtr7g100450 N 0.868
Glyma16g04590.1 Glycine max Glyma16g04590.1 N 0.868
A9PED2_POPTR Populus trichocarpa POPTR_0019s04990 N 0.835
29950.m001140 Ricinus communis 29950.m001140 N 0.824
ECT3 Arabidopsis thaliana AT5G61020-TAIR-G N 0.813
XM_002866364.1 Arabidopsis lyrata fgenesh2_kg.8__2071__AT5G61020.1 N 0.802
GSVIVG00033395001 Vitis vinifera GSVIVG00033395001 N 0.802
ECT1 Arabidopsis thaliana AT3G03950-TAIR-G N 0.780
GSVIVG00025494001 Vitis vinifera GSVIVG00025494001 N 0.780
BRADI1G05970 Brachypodium distachyon BRADI1G05970 N 0.780
cassava22612.valid.m1 Manihot esculenta cassava22612.valid.m1 N 0.780
SB01G005500 Sorghum bicolor Sb01g005500 N 0.780
cassava35666.valid.m1 Manihot esculenta cassava35666.valid.m1 N 0.769
cassava12389.valid.m1 Manihot esculenta cassava12389.valid.m1 N 0.769
cassava35665.valid.m1 Manihot esculenta cassava35665.valid.m1 N 0.769
cassava12386.valid.m1 Manihot esculenta cassava12386.valid.m1 N 0.769
cassava35663.valid.m1 Manihot esculenta cassava35663.valid.m1 N 0.769
XM_002882275.1 Arabidopsis lyrata fgenesh2_kg.3__349__AT3G03950.3 N 0.769
cassava35660.valid.m1 Manihot esculenta cassava35660.valid.m1 N 0.769
cassava35661.valid.m1 Manihot esculenta cassava35661.valid.m1 N 0.769
cassava12387.valid.m1 Manihot esculenta cassava12387.valid.m1 N 0.769
cassava12388.valid.m1 Manihot esculenta cassava12388.valid.m1 N 0.769
cassava35667.valid.m1 Manihot esculenta cassava35667.valid.m1 N 0.769
cassava35657.valid.m1 Manihot esculenta cassava35657.valid.m1 N 0.769
cassava35658.valid.m1 Manihot esculenta cassava35658.valid.m1 N 0.769
cassava38867.m1 Manihot esculenta cassava38867.m1 N 0.769
MDP0000718677 Malus x domestica MDP0000718677 N 0.769
cassava38866.m1 Manihot esculenta cassava38866.m1 N 0.769
cassava35659.valid.m1 Manihot esculenta cassava35659.valid.m1 N 0.769
cassava35662.valid.m1 Manihot esculenta cassava35662.valid.m1 N 0.769
SB02G003990 Sorghum bicolor Sb02g003990 N 0.769
mgf013853m Mimulus guttatus mgf013853m N 0.758
mgf009938m Mimulus guttatus mgf009938m N 0.758
mgf013935m Mimulus guttatus mgf013935m N 0.758
cassava30728.valid.m1 Manihot esculenta cassava30728.valid.m1 N 0.758
MDP0000129009 Malus x domestica MDP0000129009 N 0.758
PDK_20s1308332g001 Phoenix dactylifera PDK_20s1308332g001 N 0.758
cassava30727.valid.m1 Manihot esculenta cassava30727.valid.m1 N 0.758
BRADI4G02150 Brachypodium distachyon BRADI4G02150 N 0.758
GRMZM2G144726 Zea mays GRMZM2G144726 N 0.758
cassava30729.valid.m1 Manihot esculenta cassava30729.valid.m1 N 0.758
B9GXX7_POPTR Populus trichocarpa POPTR_0003s20840 N 0.747
cassava20494.m1 Manihot esculenta cassava20494.m1 N 0.747
cassava20495.m1 Manihot esculenta cassava20495.m1 N 0.747
cassava18205.valid.m1 Manihot esculenta cassava18205.valid.m1 N 0.747
cassava18204.valid.m1 Manihot esculenta cassava18204.valid.m1 N 0.747
cassava18203.valid.m1 Manihot esculenta cassava18203.valid.m1 N 0.747
SB01G008170 Sorghum bicolor Sb01g008170 N 0.736
XM_002884922.1 Arabidopsis lyrata fgenesh2_kg.3__1434__AT3G13460.1 N 0.736
PK23716.1 Cannabis sativa PK23716.1 N 0.736
BRADI3G18190 Brachypodium distachyon BRADI3G18190 N 0.736
Medtr4g136900 Medicago truncatula Medtr4g136900 N 0.736
BGIOSIBCE023845 Oryza indica BGIOSIBCE023845 N 0.736
ECT2 Arabidopsis thaliana AT3G13460-TAIR-G N 0.736
LOC_Os07g07490 Oryza sativa LOC_Os07g07490 N 0.736
GRMZM2G126338 Zea mays GRMZM2G126338 N 0.736
Cucsa.142200 Cucumis sativus Cucsa.142200 N 0.725
MDP0000124048 Malus x domestica MDP0000124048 N 0.725
GSVIVG00029460001 Vitis vinifera GSVIVG00029460001 N 0.725
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.725
SB07G006330 Sorghum bicolor Sb07g006330 N 0.725
XM_002882758.1 Arabidopsis lyrata fgenesh2_kg.3__1376__AT3G13060.2 N 0.725
GRMZM2G442195 Zea mays GRMZM2G442195 N 0.714
mgf019821m Mimulus guttatus mgf019821m N 0.714
GRMZM2G330019 Zea mays GRMZM2G330019 N 0.714
BRADI1G74560 Brachypodium distachyon BRADI1G74560 N 0.714
Sb01g046550 Sorghum bicolor Sb01g046550 N 0.714
LOC_Os04g51940 Oryza sativa LOC_Os04g51940 N 0.714
LOC_Os03g53670 Oryza sativa LOC_Os03g53670 N 0.714
29890.m000285 Ricinus communis 29890.m000285 N 0.714
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.714
Glyma05g30020.1 Glycine max Glyma05g30020.1 N 0.714
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.714
GSVIVG00032236001 Vitis vinifera GSVIVG00032236001 N 0.703
MDP0000488588 Malus x domestica MDP0000488588 N 0.703
GRMZM2G076062 Zea mays GRMZM2G076062 N 0.703
Glyma08g13130.1 Glycine max Glyma08g13130.1 N 0.703
PK17832.1 Cannabis sativa PK17832.1 N 0.703
BGIOSIBCE009738 Oryza indica BGIOSIBCE009738 N 0.703
B9HG69_POPTR Populus trichocarpa POPTR_0007s15150 N 0.703
LOC_Os03g06240 Oryza sativa LOC_Os03g06240 N 0.703
XM_002891791.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1004195 N 0.703
B9N5D4_POPTR Populus trichocarpa POPTR_0014s00320 N 0.703