CELF6 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000002503 T42548_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.773
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.745
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000002346 RRM 48 117
ENSTTRP00000002346 RRM 136 203
ENSTTRP00000002346 RRM 437 468

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRUNOL6 Homo sapiens ENSG00000140488 D 0.773
BRUNOL5 Homo sapiens ENSG00000161082 D 0.000
BRUNOL4 Homo sapiens ENSG00000101489 D 0.787
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.773
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.000
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.000
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.000
CELF6 Sus scrofa ENSSSCG00000001928 I 0.782
CELF4 Tupaia belangeri ENSTBEG00000010647 I 0.000
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.000
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.737
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.782
CELF4 Otolemur garnettii ENSOGAG00000010018 I 0.000
CELF4 Ochotona princeps ENSOPRG00000014415 I 0.742
CELF5 Oryzias latipes ENSORLG00000004600 I 0.000
CELF4 Oryzias latipes ENSORLG00000008913 I 0.000
CELF3 Oryzias latipes ENSORLG00000010447 I 0.000
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.768
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.787
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.000
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.763
CELF4 Tetraodon nigroviridis ENSTNIG00000010679 I 0.000
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.000
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.000
ACH69785 Xenopus laevis ACH69785 I 0.000
ACH69784 Xenopus laevis ACH69784 I 0.728
AAH72134 Xenopus laevis AAH72134 I 0.000
AAH57704 Xenopus laevis AAH57704 I 0.000
AAH46942 Xenopus laevis AAH46942 I 0.000
AAA81375 Xenopus laevis AAA81375 I 0.000
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.000
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.782
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.000
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.000
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.000
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.000
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.732
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.702
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.000
Q91579 Xenopus laevis Q91579 I 0.000
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.000
A6H776_BOVIN Bos taurus ENSBTAG00000004940 I 0.000
ENSDARG00000076682 Danio rerio ENSDARG00000076682 I 0.000
CELF3 Equus caballus ENSECAG00000020365 I 0.000
CELF6 Felis catus ENSFCAG00000016249 I 0.782
CELF3 Homo sapiens ENSG00000159409 I 0.000
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.000
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.000
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.779
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.737
celf5 Danio rerio ENSDARG00000071375 I 0.000
celf3 Danio rerio ENSDARG00000034668 I 0.000
CELF6 Bos taurus ENSBTAG00000014092 I 0.782
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.000
CELF3 Canis familiaris ENSCAFG00000012794 I 0.000
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.000
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.768
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.787
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.000
CELF3 Danio rerio ENSDARG00000006983 I 0.000
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.777
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.000
Celf6 Mus musculus ENSMUSG00000032297 I 0.773
Celf3 Mus musculus ENSMUSG00000028137 I 0.000
Celf4 Mus musculus ENSMUSG00000024268 I 0.787
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.000
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.798
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.000
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.768
HEXA Macaca mulatta ENSMMUG00000010687 I 0.777
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.000
CELF4 Macaca mulatta ENSMMUG00000006866 I 0.000
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.000
CELF6 Macropus eugenii ENSMEUG00000010988 I 0.901
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.000
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.769
CELF5 Ornithorhynchus anatinus ENSOANG00000009501 N 0.000
Celf5 Mus musculus ENSMUSG00000034818 N 0.000
CELF4 Sus scrofa ENSSSCG00000003748 N 0.000
ENSCAFG00000017759 Canis familiaris ENSCAFG00000017759 N 0.000
CELF4 Monodelphis domestica ENSMODG00000000306 N 0.000
Ame_R008026 Ailuropoda melanoleuca Ame_R008026 N 0.000
fgenesh2_pg.scaffold_186000062 Branchiostoma floridae fgenesh2_pg.scaffold_186000062 N 0.000
CELF4 Pan troglodytes ENSPTRG00000009982 N 0.000