CELF3 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000012064 T42327_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000030511 RRM 1 33
ENSTRUP00000030511 RRM 52 120
ENSTRUP00000030511 RRM 351 421
ENSTRUP00000030512 RRM 1 33
ENSTRUP00000030512 RRM 52 120
ENSTRUP00000030512 RRM 275 345
ENSTRUP00000030513 RRM 49 117
ENSTRUP00000030513 RRM 334 404
ENSTRUP00000030514 RRM 1 30
ENSTRUP00000030514 RRM 58 126
ENSTRUP00000030514 RRM 317 355

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002883381.1 Arabidopsis lyrata fgenesh2_kg.3__2553__AT3G23370.1 N 0.000