HNRNPA3 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000005513 T38498_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.775
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.775
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.775
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.761
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.725
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000005020 RRM 10 73
ENSMICP00000005020 RRM 100 170

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

186 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.782
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.810
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.789
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.894
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.782
LOC781499 Bos taurus ENSBTAG00000021580 I 0.888
LOC785445 Bos taurus ENSBTAG00000025621 I 0.755
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.720
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.761
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.853
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.796
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.727
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.713
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.782
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.782
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.888
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.768
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.732
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.782
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.706
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.775
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.708
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.761
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.706
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.754
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.725
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.720
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.782
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.732
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.716
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.739
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.708
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.746
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.775
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.715
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.888
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.701
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.711
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.710
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.754
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.701
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.761
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.895
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.888
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.711
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.754
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.888
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.782
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.704
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.797
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.743
LOC100066794 Equus caballus ENSECAG00000023237 I 0.894
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.782
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.775
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.727
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.754
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.782
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.894
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.887
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.725
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.746
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.782
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.888
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.768
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.851
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.858
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.782
HNRNPA3 Homo sapiens ENSG00000170144 I 0.888
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.768
HNRNPA1 Homo sapiens ENSG00000135486 D 0.782
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.746
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.789
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.768
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.804
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.789
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.782
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.761
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.706
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.761
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.775
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.727
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.888
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.888
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.782
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.887
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.730
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.888
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.711
Gm8991 Mus musculus ENSMUSG00000059179 I 0.887
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.888
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.782
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.761
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.888
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.768
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.782
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.722
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.775
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.768
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.782
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.775
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.775
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.754
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.720
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.775
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.768
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.761
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.782
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.881
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.775
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.717
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.739
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.739
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.761
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.782
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.782
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.865
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.888
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.782
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.782
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.853
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.733
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.839
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.830
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.739
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.782
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.888
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.786
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.803
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.866
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.729
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.713
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.782
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.880
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.754
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.705
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.747
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.711
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.720
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.761
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.860
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.888
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.739
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.720
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.720
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.838
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.732
ENSRNOG00000022655 Rattus norvegicus ENSRNOG00000022655 N 0.732
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.700
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.700
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.720
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.811
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.888
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.845
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.704
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.804
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.888
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.782
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.887
Q1KKS6_FUGRU Takifugu rubripes ENSTRUG00000017504 I 0.746
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.746
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.725
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.746
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.782
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.713
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.734
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.888
ENSTTRG00000015563 Tursiops truncatus ENSTTRG00000015563 I 0.727
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.782
CBF67578 Xenopus laevis CBF67578 I 0.866
CBF67672 Xenopus laevis CBF67672 I 0.746
CBU92428 Xenopus laevis CBU92428 I 0.732
CBU92451 Xenopus laevis CBU92451 I 0.866
CBU92546 Xenopus laevis CBU92546 I 0.746
P17130 Xenopus laevis P17130 I 0.732
P51968 Xenopus laevis P51968 I 0.852
CBF67555 Xenopus laevis CBF67555 I 0.732
AAI69881 Xenopus laevis AAI69881 I 0.866
AAH72090 Xenopus laevis AAH72090 I 0.746
AAH45260 Xenopus laevis AAH45260 I 0.746
AAA49950 Xenopus laevis AAA49950 I 0.866
AAA49949 Xenopus laevis AAA49949 I 0.852
AAA49742 Xenopus laevis AAA49742 I 0.732
AAA49741 Xenopus laevis AAA49741 I 0.732
P51992 Xenopus laevis P51992 I 0.866
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.754
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.859