Brunol6 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000010817 T41074_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.986
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.843
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.749
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.725
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000014450 RRM 48 117
ENSRNOP00000014450 RRM 136 204
ENSRNOP00000014450 RRM 377 447

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002881412.1 Arabidopsis lyrata fgenesh2_kg.4__1704__AT2G36660.1 N 0.000
Cucsa.378900 Cucumis sativus Cucsa.378900 N 0.000
Glyma13g21190.1 Glycine max Glyma13g21190.1 N 0.000
Glyma10g07280.1 Glycine max Glyma10g07280.1 N 0.000
Glyma03g34580.1 Glycine max Glyma03g34580.1 N 0.000
cassava15018.m1 Manihot esculenta cassava15018.m1 N 0.000
Medtr1g073940 Medicago truncatula Medtr1g073940 N 0.000
Medtr7g124520 Medicago truncatula Medtr7g124520 N 0.000
mgf012987m Mimulus guttatus mgf012987m N 0.000
ppa020841m Prunus persica ppa020841m N 0.000
30078.m002213 Ricinus communis 30078.m002213 N 0.000
GSVIVG00033724001 Vitis vinifera GSVIVG00033724001 N 0.000