ppa005056m (Prunus persica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ppa005056m T06513_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa005056m CCCH ZF 47 73
ppa005056m CCCH ZF 94 119
ppa005056m CCCH ZF 139 165
ppa005056m CCCH ZF 302 328
ppa005056m CCCH ZF 348 374

Links

Other CCCH ZF family RBPs
Other Prunus persica RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g23190 Oryza sativa LOC_Os03g23190 N 0.000
LOC_Os05g17350 Oryza sativa LOC_Os05g17350 N 0.000
LOC_Os06g16850 Oryza sativa LOC_Os06g16850 N 0.000
LOC_Os06g31670 Oryza sativa LOC_Os06g31670 N 0.000
LOC_Os07g25850 Oryza sativa LOC_Os07g25850 N 0.000
LOC_Os09g14330 Oryza sativa LOC_Os09g14330 N 0.000
LOC_Os09g14370 Oryza sativa LOC_Os09g14370 N 0.000