ENSEEUG00000011837 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000011837 T36828_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.844
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.844
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.844
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.830
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.709
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000010777 RRM 16 85
ENSEEUP00000010777 RRM 107 176

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

202 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R003219 Ailuropoda melanoleuca Ame_R003219 N 0.000
CAC95017 Xenopus laevis CAC95017 N 0.000
TIAL1 Erinaceus europaeus ENSEEUG00000011861 N 0.000
TIAL1 Echinops telfairi ENSETEG00000020276 N 0.000
TIAL1 Loxodonta africana ENSLAFG00000003412 N 0.000
TIAL1 Meleagris gallopavo ENSMGAG00000011368 N 0.000
TIAL1 Myotis lucifugus ENSMLUG00000004645 N 0.000
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.000
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.000
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.000
TIAL1 Otolemur garnettii ENSOGAG00000011417 N 0.000
TIAL1 Sorex araneus ENSSARG00000012980 N 0.000
TIAL1 Taeniopygia guttata ENSTGUG00000011148 N 0.000
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.000
tial1 Xenopus tropicalis ENSXETG00000010234 N 0.000