Glyma06g10750.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma06g10750.1 T52676_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma06g10750.1 RRM 40 108

Links

Other RRM family RBPs
Other Glycine max RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma04g10900.1 Glycine max Glyma04g10900.1 I 0.971
Glyma14g35110.1 Glycine max Glyma14g35110.1 I 0.899
Glyma13g01740.1 Glycine max Glyma13g01740.1 I 0.899
Medtr5g073010 Medicago truncatula Medtr5g073010 I 0.884
B9GUX4_POPTR Populus trichocarpa POPTR_0002s09830 I 0.870
cassava44391.m1 Manihot esculenta cassava44391.m1 I 0.870
PK15672.1 Cannabis sativa PK15672.1 I 0.870
Cucsa.311530 Cucumis sativus Cucsa.311530 I 0.855
ppa019392m Prunus persica ppa019392m I 0.841
29908.m006046 Ricinus communis 29908.m006046 I 0.841
ppa018926m Prunus persica ppa018926m I 0.841
cassava39454.m1 Manihot esculenta cassava39454.m1 I 0.826
MDP0000134468 Malus x domestica MDP0000134468 I 0.826
GSVIVG00009045001 Vitis vinifera GSVIVG00009045001 I 0.826
AT1G78260 Arabidopsis thaliana AT1G78260-TAIR-G N 0.826
mgf017214m Mimulus guttatus mgf017214m I 0.826
PK21213.1 Cannabis sativa PK21213.1 I 0.812
Cucsa.005270 Cucumis sativus Cucsa.005270 I 0.812
XM_002887685.1 Arabidopsis lyrata fgenesh2_kg.2__2123__AT1G78260.1 N 0.812
B9H5W4_POPTR Populus trichocarpa POPTR_0005s27810 I 0.797
XM_002890463.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001899 N 0.797
Cucsa.160090 Cucumis sativus Cucsa.160090 I 0.797
AT1G22330 Arabidopsis thaliana AT1G22330-TAIR-G N 0.797
cassava7423.valid.m1 Manihot esculenta cassava7423.valid.m1 I 0.797
B9GPN6_POPTR Populus trichocarpa POPTR_0002s00610 I 0.797
MDP0000233609 Malus x domestica MDP0000233609 I 0.783
Medtr3g159840 Medicago truncatula Medtr3g159840 I 0.783
LjSGA_018073.2 Lotus japonicus LjSGA_018073.2 I 0.768
gw1.41.247.1 Selaginella moellendorfii gw1.41.247.1 I 0.754
Glyma16g02120.1 Glycine max Glyma16g02120.1 I 0.754
Glyma06g01670.1 Glycine max Glyma06g01670.1 I 0.754
gw1.51.103.1 Physcomitrella patens gw1.51.103.1 I 0.754
XM_002889039.1 Arabidopsis lyrata fgenesh2_kg.2__1933__AT1G76460.1 I 0.754
Glyma04g01590.1 Glycine max Glyma04g01590.1 I 0.754
ppa009716m Prunus persica ppa009716m I 0.754
ppa009964m Prunus persica ppa009964m I 0.754
cassava23406.valid.m1 Manihot esculenta cassava23406.valid.m1 I 0.739
Glyma07g05670.1 Glycine max Glyma07g05670.1 I 0.739
cassava23405.valid.m1 Manihot esculenta cassava23405.valid.m1 I 0.739
Glyma16g02220.1 Glycine max Glyma16g02220.1 I 0.739
AT1G76460-TAIR-G Arabidopsis thaliana AT1G76460-TAIR-G D 0.739
MDP0000488395 Malus x domestica MDP0000488395 I 0.739
MDP0000548950 Malus x domestica MDP0000548950 I 0.739
XM_002880217.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002831 I 0.739
MDP0000284454 Malus x domestica MDP0000284454 I 0.739
MDP0000138486 Malus x domestica MDP0000138486 I 0.739
CU179634_3 Medicago truncatula CU179634_3 I 0.739
gw1.126.80.1 Physcomitrella patens gw1.126.80.1 I 0.739
MDP0000118777 Malus x domestica MDP0000118777 I 0.739
MDP0000857317 Malus x domestica MDP0000857317 I 0.739
MDP0000744398 Malus x domestica MDP0000744398 I 0.739
Glyma07g05590.1 Glycine max Glyma07g05590.1 I 0.739
ppa016222m Prunus persica ppa016222m I 0.739
30076.m004440 Ricinus communis 30076.m004440 I 0.725
PK14266.1 Cannabis sativa PK14266.1 I 0.725
AT2G46780 Arabidopsis thaliana AT2G46780-TAIR-G I 0.725
A9PAJ1_POPTR Populus trichocarpa POPTR_0014s10090 I 0.725
BRADI1G45540 Brachypodium distachyon BRADI1G45540 I 0.725
GRMZM2G073700 Zea mays GRMZM2G073700 I 0.710
Cucsa.348630 Cucumis sativus Cucsa.348630 I 0.710
B9GRQ8_POPTR Populus trichocarpa POPTR_0002s17990 I 0.710
cassava32990.m1 Manihot esculenta cassava32990.m1 I 0.710
cassava39418.m1 Manihot esculenta cassava39418.m1 I 0.710
ppa018603m Prunus persica ppa018603m I 0.710
MDP0000184420 Malus x domestica MDP0000184420 I 0.710