CELF5 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000010259 T40696_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.962
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.810
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.739
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.735
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000017431 RRM 47 116
ENSPTRP00000017431 RRM 118 186
ENSPTRP00000017431 RRM 384 454
ENSPTRP00000017434 RRM 47 116
ENSPTRP00000017434 RRM 118 186

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA81375 Xenopus laevis AAA81375 I 0.814
AAH46942 Xenopus laevis AAH46942 I 0.805
AAH57704 Xenopus laevis AAH57704 I 0.814
AAH72134 Xenopus laevis AAH72134 I 0.814
ACH69784 Xenopus laevis ACH69784 I 0.754
ACH69785 Xenopus laevis ACH69785 I 0.876
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.805
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.810
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.952
Bm1_27610 Brugia malayi Bm1_27610 I 0.767
unc-75 Caenorhabditis elegans C17D12.2 D 0.735
CBG15358 Caenorhabditis briggsae CBG15358 I 0.735
CRE09771 Caenorhabditis remanei CRE09771 I 0.735
CELF6 Bos taurus ENSBTAG00000014092 I 0.810
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.805
CELF5 Bos taurus ENSBTAG00000021774 I 0.768
CELF3 Canis familiaris ENSCAFG00000012794 I 0.805
CELF6 Canis familiaris ENSCAFG00000017695 N 0.770
CELF5 Canis familiaris ENSCAFG00000019263 I 0.781
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.805
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.805
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.744
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.805
CELF3 Danio rerio ENSDARG00000006983 I 0.786
celf3 Danio rerio ENSDARG00000034668 I 0.795
celf5 Danio rerio ENSDARG00000071375 I 0.871
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.767
Celf5 Dipodomys ordii ENSDORG00000005915 I 0.757
CELF3 Equus caballus ENSECAG00000020365 I 0.805
CELF5 Echinops telfairi ENSETEG00000016221 I 0.752
CELF6 Felis catus ENSFCAG00000016249 I 0.810
BRUNOL4 Homo sapiens ENSG00000101489 D 0.744
BRUNOL6 Homo sapiens ENSG00000140488 D 0.810
CELF3 Homo sapiens ENSG00000159409 I 0.805
BRUNOL5 Homo sapiens ENSG00000161082 D 0.962
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.786
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.754
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.829
CELF5 Gallus gallus ENSGALG00000017694 N 0.741
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.744
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.810
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.805
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.802
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.843
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.805
CELF5 Macropus eugenii ENSMEUG00000013080 I 0.787
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.752
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.790
HEXA Macaca mulatta ENSMMUG00000010687 I 0.810
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.700
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.829
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.805
Celf4 Mus musculus ENSMUSG00000024268 I 0.838
Celf3 Mus musculus ENSMUSG00000028137 I 0.805
Celf6 Mus musculus ENSMUSG00000032297 I 0.814
Celf5 Mus musculus ENSMUSG00000034818 N 0.914
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.744
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.805
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.714
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.843
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.762
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.771
CELF5 Oryzias latipes ENSORLG00000004600 I 0.876
CELF4 Oryzias latipes ENSORLG00000008913 I 0.838
CELF3 Oryzias latipes ENSORLG00000010447 I 0.780
CELF3 Procavia capensis ENSPCAG00000001623 I 0.781
CELF5 Procavia capensis ENSPCAG00000002170 I 0.754
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.805
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.799
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.805
CELF4 Pan troglodytes ENSPTRG00000009982 N 0.799
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.795
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.810
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.744
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.776
Brunol5 Rattus norvegicus ENSRNOG00000004695 N 0.914
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.814
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.805
CELF6 Sus scrofa ENSSSCG00000001928 I 0.810
CELF3 Sus scrofa ENSSSCG00000006618 I 0.786
CELF5 Sus scrofa ENSSSCG00000013476 I 0.773
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.752
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.829
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.814
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.824
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.776
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.739
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.867
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.848
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.800
NCBI_GNO_7600086 Daphnia pulex NCBI_GNO_7600086 N 0.705
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.805
Q91579 Xenopus laevis Q91579 I 0.814
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.703
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.703