ACH69785 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ACH69785 T59672_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.914
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.819
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.768
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.763
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ACH69785 RRM 48 117
ACH69785 RRM 136 204
ACH69785 RRM 401 471

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.924
CELF5 Bos taurus ENSBTAG00000021774 I 0.735
CELF5 Canis familiaris ENSCAFG00000019263 I 0.748
CELF6 Cavia porcellus ENSCPOG00000025842 I 0.000
celf4 Danio rerio ENSDARG00000070045 I 0.000
celf5 Danio rerio ENSDARG00000071375 I 0.881
Celf5 Dipodomys ordii ENSDORG00000005915 I 0.724
CELF5 Equus caballus ENSECAG00000018055 N 0.000
CELF5 Echinops telfairi ENSETEG00000016221 I 0.710
CELF3 Homo sapiens ENSG00000159409 I 0.805
BRUNOL5 Homo sapiens ENSG00000161082 D 0.914
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.871
CELF5 Loxodonta africana ENSLAFG00000026387 N 0.000
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.738
CELF3 Microcebus murinus ENSMICG00000010644 N 0.000
CELF5 Myotis lucifugus ENSMLUG00000006471 N 0.000
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.705
Celf4 Mus musculus ENSMUSG00000024268 I 0.867
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.871
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.729
CELF5 Oryzias latipes ENSORLG00000004600 I 0.876
CELF5 Procavia capensis ENSPCAG00000002170 I 0.716
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.876
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.743
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.738
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.000
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.743
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.990
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.867