CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
e_gw1.13.49.1
(
Emiliania huxleyi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
e_gw1.13.49.1
T49763_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.13.49.1
RRM
20
87
LYVRNLPFKITAEEMYDIFGKFGAIRQIRLGNASDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLV
Links
Other
RRM
family RBPs
Other
Emiliania huxleyi
RBPs
149 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN12329
Caenorhabditis brenneri
CBN12329
N
0.000
CBG02387
Caenorhabditis briggsae
CBG02387
N
0.000
EEED8
Caenorhabditis elegans
EEED8
N
0.000
CJA05884
Caenorhabditis japonica
CJA05884
N
0.000
CRE11770
Caenorhabditis remanei
CRE11770
N
0.000