ACH69785 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ACH69785 T59672_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.914
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.819
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.768
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.763
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ACH69785 RRM 48 117
ACH69785 RRM 136 204
ACH69785 RRM 401 471

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI3G20700 Brachypodium distachyon BRADI3G20700 N 0.000
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.000
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.000
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.000
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.000
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.000
ppa007812m Prunus persica ppa007812m N 0.000
SB03G027920 Sorghum bicolor Sb03g027920 N 0.000
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.000