ENSSARG00000008946 (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000008946 T41338_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.907
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.907
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.907
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.893
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000008097 RRM 16 85
ENSSARP00000008097 RRM 107 167

Links

Other RRM family RBPs
Other Sorex araneus RBPs

285 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA49741 Xenopus laevis AAA49741 I 0.836
AAA49742 Xenopus laevis AAA49742 I 0.836
AAH45260 Xenopus laevis AAH45260 I 0.836
AAH72090 Xenopus laevis AAH72090 I 0.836
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.907
CBF67555 Xenopus laevis CBF67555 I 0.836
CBF67672 Xenopus laevis CBF67672 I 0.836
CBU92428 Xenopus laevis CBU92428 I 0.836
CBU92546 Xenopus laevis CBU92546 I 0.836
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.893
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.907
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.711
LOC785445 Bos taurus ENSBTAG00000025621 I 0.858
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.745
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.000
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.789
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.809
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.782
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.724
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.796
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.000
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.803
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.886
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.816
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.790
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.754
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.843
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.907
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.816
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.738
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.871
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.811
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.705
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.741
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.734
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.727
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.893
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.838
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.741
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.776
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.831
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.809
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.786
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.727
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.796
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.734
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.789
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.818
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.824
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.739
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.864
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.768
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.804
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.837
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.824
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.823
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.886
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.900
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.844
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.816
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.731
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.816
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.729
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.750
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.886
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.856
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.844
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.837
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.830
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.907
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.907
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.816
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.879
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.879
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.843
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.907
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.850
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.886
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.907
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 1.000
LOC100054206 Equus caballus ENSECAG00000006699 I 0.817
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.907
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.864
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.893
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.823
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.907
HNRNPA1 Homo sapiens ENSG00000135486 D 0.907
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.893
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.907
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.734
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.907
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.713
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.893
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.801
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.879
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.900
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.879
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.879
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.782
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.715
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.907
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.817
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.893
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.741
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.706
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.720
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.823
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.907
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.886
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.748
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.754
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.907
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.789
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.748
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.764
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.907
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.886
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.789
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.837
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.774
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.782
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.886
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.907
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.893
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.907
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.879
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.893
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.900
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.837
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.879
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.893
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.900
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.907
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.893
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.708
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.886
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.754
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.900
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.734
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.871
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.907
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.907
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.907
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.907
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.907
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.850
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.809
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.871
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.830
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.871
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.852
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.907
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.871
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.907
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.773
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.801
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.907
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.830
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.858
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.907
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.843
P17130 Xenopus laevis P17130 I 0.836