Glyma07g33860.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma07g33860.1 T52705_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma07g33860.1 RRM 33 103
Glyma07g33860.1 RRM 121 190
Glyma07g33860.1 RRM 212 281
Glyma07g33860.1 RRM 315 384

Links

Other RRM family RBPs
Other Glycine max RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa002620m Prunus persica ppa002620m N 0.833
mgf004596m Mimulus guttatus mgf004596m N 0.779
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.754
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.708
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.843
Glyma16g27670.1 Glycine max Glyma16g27670.1 N 0.701
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.843
Glyma06g04460.1 Glycine max Glyma06g04460.1 N 0.779
Glyma04g04300.1 Glycine max Glyma04g04300.1 N 0.776
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.979
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.758
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.769
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.765
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.754
e_gw1.24.89.1 Selaginella moellendorfii e_gw1.24.89.1 N 0.730
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.701
mgf004973m Mimulus guttatus mgf004973m N 0.826
mgf005294m Mimulus guttatus mgf005294m N 0.801
mgf009542m Mimulus guttatus mgf009542m N 0.836
ppa002618m Prunus persica ppa002618m N 0.833
ppa002607m Prunus persica ppa002607m N 0.883
MDP0000497543 Malus x domestica MDP0000497543 N 0.879
MDP0000286821 Malus x domestica MDP0000286821 N 0.722
MDP0000283985 Malus x domestica MDP0000283985 N 0.804
MDP0000253709 Malus x domestica MDP0000253709 N 0.879
MDP0000212007 Malus x domestica MDP0000212007 N 0.722
MDP0000156895 Malus x domestica MDP0000156895 N 0.879
LjSGA_012037.1 Lotus japonicus LjSGA_012037.1 N 0.747
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.929
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.843
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.829
GRMZM2G352129 Zea mays GRMZM2G352129 N 0.747
GRMZM2G102829 Zea mays GRMZM2G102829 N 0.730
GRMZM2G013619 Zea mays GRMZM2G013619 N 0.740
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.875
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.858
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.883
LOC_Os04g42600 Oryza sativa LOC_Os04g42600 N 0.744
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.847
GSVIVG00013699001 Vitis vinifera GSVIVG00013699001 N 0.708
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.865
BRADI5G14980 Brachypodium distachyon BRADI5G14980 N 0.740
BRADI4G08430 Brachypodium distachyon BRADI4G08430 N 0.747
BRADI3G20460 Brachypodium distachyon BRADI3G20460 N 0.738
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.754
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.773
BGIOSIBCE015822 Oryza indica BGIOSIBCE015822 N 0.744
PAB2 Arabidopsis thaliana AT4G34110-TAIR-G N 0.804
PAB4 Arabidopsis thaliana AT2G23350-TAIR-G N 0.726
PAB8 Arabidopsis thaliana AT1G49760-TAIR-G N 0.772
XM_002869128.1 Arabidopsis lyrata Al_scaffold_0007_654 N 0.819
PK02172.1 Cannabis sativa PK02172.1 N 0.854
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.773
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.754
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.893
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.712
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.854
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.851
30170.m013847 Ricinus communis 30170.m013847 N 0.854
29801.m003152 Ricinus communis 29801.m003152 N 0.883
28644.m000904 Ricinus communis 28644.m000904 N 0.705
XM_002878634.1 Arabidopsis lyrata scaffold_400317.1 N 0.726
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.804
XM_002891485.1 Arabidopsis lyrata scaffold_104684.1 N 0.776
SB06G021850 Sorghum bicolor Sb06g021850 N 0.744
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.737
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.861
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.886
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.701
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.858
PK00659.1 Cannabis sativa PK00659.1 N 0.783