CELF5 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000004600 T40121_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.895
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.810
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.782
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000005783 RRM 24 93
ENSORLP00000005783 RRM 112 180
ENSORLP00000005783 RRM 384 454

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CG1340 Drosophila melanogaster FBgn0039797 N 0.000
GM12901 Drosophila sechellia FBgn0167833 N 0.000
GM13442 Drosophila sechellia FBgn0168373 N 0.000
GJ19028 Drosophila virilis FBgn0206174 N 0.000
GJ24240 Drosophila virilis FBgn0211322 N 0.000
GK14152 Drosophila willistoni FBgn0216158 N 0.000
GK25675 Drosophila willistoni FBgn0227634 N 0.000
GE10899 Drosophila yakuba FBgn0228732 N 0.000
GE17274 Drosophila yakuba FBgn0234750 N 0.000
GL20267 Drosophila persimilis FBgn0157862 N 0.000
GL13513 Drosophila persimilis FBgn0151118 N 0.000
GI21487 Drosophila mojavensis FBgn0144217 N 0.000
GA12257-RA Drosophila pseudoobscura FBgn0072303 N 0.000
GA18178-RA Drosophila pseudoobscura FBgn0078185 N 0.000
GF19517 Drosophila ananassae FBgn0096524 N 0.000
GF22920 Drosophila ananassae FBgn0099914 N 0.000
GG11771 Drosophila erecta FBgn0104066 N 0.000
GG17966 Drosophila erecta FBgn0110185 N 0.000
GH14211 Drosophila grimshawi FBgn0121687 N 0.000
GH22433 Drosophila grimshawi FBgn0129891 N 0.000
FBgn0262734 Drosophila melanogaster FBgn0262734 N 0.000