ENSEEUG00000009941 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000009941 T36811_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.844
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.844
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.844
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.830
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.723
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000009034 RRM 16 85
ENSEEUP00000009034 RRM 107 176

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

205 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA49741 Xenopus laevis AAA49741 I 0.780
AAA49742 Xenopus laevis AAA49742 I 0.780
AAA49949 Xenopus laevis AAA49949 I 0.738
AAA49950 Xenopus laevis AAA49950 I 0.727
AAH45260 Xenopus laevis AAH45260 I 0.794
AAH72090 Xenopus laevis AAH72090 I 0.794
AAI69881 Xenopus laevis AAI69881 I 0.727
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.851
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.779
CBF67555 Xenopus laevis CBF67555 I 0.780
CBF67578 Xenopus laevis CBF67578 I 0.727
CBF67672 Xenopus laevis CBF67672 I 0.794
CBU92428 Xenopus laevis CBU92428 I 0.780
CBU92451 Xenopus laevis CBU92451 I 0.727
CBU92546 Xenopus laevis CBU92546 I 0.794
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.723
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.730
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.794
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.830
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.807
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.837
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.761
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.800
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.761
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.782
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.761
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.793
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.769
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.809
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.769
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.776
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.706
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.729
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.837
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.796
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.717
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.739
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.757
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.724
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.775
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.721
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.761
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.761
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.769
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.761
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.732
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.755
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.793
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.793
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.739
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.782
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.779
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.801
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.722
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.800
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.722
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.704
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.794
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.807
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.807
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.750
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.851
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.793
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.823
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.809
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.750
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.771
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.851
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.800
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.739
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.830
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.851
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.823
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.851
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.871
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.779
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.851
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.851
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.717
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.773
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.743
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.837
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.793
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.771
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.830
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.734
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.844
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.830
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.810
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.746
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.851
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.796
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.844
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.739
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.800
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.703
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.710
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.757
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.719
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.800
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.747
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.761
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.823
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.837
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.851
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.816
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.837
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.844
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.800
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.823
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.837
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.844
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.851
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.844
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.844
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.844
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.759
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.743
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.704
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.830
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.851
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.801
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.793
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.779
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.750
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.817
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.830
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.773
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.851
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.743
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.793
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.851
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.800
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.836
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.730
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.851
Gm8991 Mus musculus ENSMUSG00000059179 I 0.738
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.773
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.801
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.738
HNRNPA1 Homo sapiens ENSG00000135486 D 0.851
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.851
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.851
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.851
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.837
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.851
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.739
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.738
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.745
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.739
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.739
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.739
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.739
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.738
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.739
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.739
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.739
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.739
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.702
HNRNPA3 Homo sapiens ENSG00000170144 I 0.739
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.738
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.739
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.739
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.745
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.739
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.738
LOC100054206 Equus caballus ENSECAG00000006699 I 0.782
LOC100066794 Equus caballus ENSECAG00000023237 I 0.738
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.739
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.851
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.800
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.844
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.837
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.823
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.739
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.830
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.830
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.844
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.844
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.851
LOC781499 Bos taurus ENSBTAG00000021580 I 0.739
LOC785445 Bos taurus ENSBTAG00000025621 I 0.821
P17130 Xenopus laevis P17130 I 0.780
P51968 Xenopus laevis P51968 I 0.738
P51992 Xenopus laevis P51992 I 0.727
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.738
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.851
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.851
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.830
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.851
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.851
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.851
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.739
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.754
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.851
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.754
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.707
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.823
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.816
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.780
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.793
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.764
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.761
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.722
zgc:66127 Danio rerio ENSDARG00000011020 I 0.702