HNRNPA3 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000005513 T38498_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.775
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.775
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.775
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.761
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.725
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000005020 RRM 10 73
ENSMICP00000005020 RRM 100 170

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

186 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA49741 Xenopus laevis AAA49741 I 0.732
AAA49742 Xenopus laevis AAA49742 I 0.732
AAH45260 Xenopus laevis AAH45260 I 0.746
AAH72090 Xenopus laevis AAH72090 I 0.746
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.782
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.000
CBF67555 Xenopus laevis CBF67555 I 0.732
CBF67672 Xenopus laevis CBF67672 I 0.746
CBU92428 Xenopus laevis CBU92428 I 0.732
CBU92546 Xenopus laevis CBU92546 I 0.746
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.789
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.782
LOC785445 Bos taurus ENSBTAG00000025621 I 0.755
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.000
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.000
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.000
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.000
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.000
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.000
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.000
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.708
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.739
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.716
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.000
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.000
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.000
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.732
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.782
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.720
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.000
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.746
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.000
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.000
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.000
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.775
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.715
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.000
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.000
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.000
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.701
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.000
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.000
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.000
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.000
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.000
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.000
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.710
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.701
ENSCAFG00000020428 Canis familiaris ENSCAFG00000020428 I 0.000
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.000
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.754
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.000
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.000
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.706
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.708
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.000
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.761
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.775
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.727
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.000
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.000
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.000
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.761
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.725
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.720
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.713
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.000
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.000
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.782
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.782
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.000
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.768
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.754
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.732
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.000
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.782
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.706
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.761
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.782
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.704
LOC100054206 Equus caballus ENSECAG00000006699 I 0.000
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.782
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.754
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.775
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.743
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.782
HNRNPA1 Homo sapiens ENSG00000135486 D 0.782
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.768
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.782
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.000
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.746
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.782
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.000
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.000
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.768
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.000
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.000
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.768
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.789
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.746
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.782
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.730
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.000
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.782
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.722
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.768
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.000
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.000
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.000
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.727
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.775
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.761
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.000
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.782
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.000
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.000
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.000
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.000
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.789
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.761
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.000
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.706
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.000
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.000
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.761
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.782
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.775
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.782
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.761
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.768
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.775
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.720
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.754
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.775
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.775
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.782
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.768
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.761
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.000
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.775
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.000
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.000
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.739
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.782
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.782
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.782
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.782
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.782
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.739
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.720
ENSRNOG00000017651 Rattus norvegicus ENSRNOG00000017651 I 0.000
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.000
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.732
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.720
D3ZQR9_RAT Rattus norvegicus ENSRNOG00000027605 I 0.000
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.761
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.729
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.782
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.754
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.704
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.782
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.000
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.782
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.713
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.734
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.782
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.754
P17130 Xenopus laevis P17130 I 0.732