Pcbp3 (Rattus norvegicus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSRNOG00000001245 T19422_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		1.000
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.883
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.883
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.862
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.862
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000001675 KH 15 75
ENSRNOP00000001675 KH 99 162
ENSRNOP00000001675 KH 243 305
ENSRNOP00000040960 KH 47 107
ENSRNOP00000040960 KH 131 194
ENSRNOP00000040960 KH 295 357
ENSRNOP00000049917 KH 15 75
ENSRNOP00000049917 KH 99 162

Links

Other KH family RBPs
Other Rattus norvegicus RBPs

157 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK05606.1 Cannabis sativa PK05606.1 N 0.000
RS2Z33 Arabidopsis thaliana AT2G37340-TAIR-G N 0.000
At-RS2Z Arabidopsis thaliana AT3G53500-TAIR-G N 0.000
GSVIVG00025580001 Vitis vinifera GSVIVG00025580001 N 0.000
LOC_Os01g06290 Oryza sativa LOC_Os01g06290 N 0.000
A9PGS4_POPTR Populus trichocarpa POPTR_0006s23170 N 0.000