PTBP2 (Myotis lucifugus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMLUG00000002522 T38626_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PTBP1
M303_0.6 		Homo sapiens Sequence logo not available UCUU SELEX
Cook et al.(2011)
46_9214659 		0.782
PTBP1
M228_0.6 		Homo sapiens HYUUUYU RNAcompete
Ray et al.(2013)
RNCMPT00269 		0.782
PTBP1
M227_0.6 		Homo sapiens HYUUUYU RNAcompete
Ray et al.(2013)
RNCMPT00268 		0.782
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000002293 RRM 48 103
ENSMLUP00000002293 RRM 170 236
ENSMLUP00000002293 RRM 326 392
ENSMLUP00000002293 RRM 443 507

Links

Other RRM family RBPs
Other Myotis lucifugus RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAF00041 Xenopus laevis AAF00041 I 0.763
AAH45068 Xenopus laevis AAH45068 I 0.760
AAH97557 Xenopus laevis AAH97557 I 0.704
Ame_R002925 Ailuropoda melanoleuca Ame_R002925 I 0.980
ENSETEG00000006890 Echinops telfairi ENSETEG00000006890 I 0.703
ENSMLUG00000003320 Myotis lucifugus ENSMLUG00000003320 I 0.734
ENSPPYG00000001132 Pongo pygmaeus ENSPPYG00000001132 I 0.977
ENSPPYG00000009289 Pongo pygmaeus ENSPPYG00000009289 I 0.782
ENSPPYG00000019504 Pongo pygmaeus ENSPPYG00000019504 I 0.732
LOC100057336 Equus caballus ENSECAG00000015783 I 0.973
PTBP1 Gasterosteus aculeatus ENSGACG00000011048 I 0.725
PTBP1 Sus scrofa ENSSSCG00000013421 I 0.778
Ptbp1 Rattus norvegicus ENSRNOG00000010448 I 0.773
PTBP1 Macaca mulatta ENSMMUG00000016450 I 0.735
PTBP1 Loxodonta africana ENSLAFG00000027110 I 0.716
PTBP1 Macropus eugenii ENSMEUG00000006710 I 0.774
PTBP1 Meleagris gallopavo ENSMGAG00000003503 I 0.774
PTBP1 Oryzias latipes ENSORLG00000011430 I 0.720
PTBP1 Ornithorhynchus anatinus ENSOANG00000009191 I 0.752
PTBP1 Monodelphis domestica ENSMODG00000006302 I 0.774
Ptbp1 Mus musculus ENSMUSG00000006498 I 0.773
PTBP1 Equus caballus ENSECAG00000018845 I 0.759
PTBP1 Taeniopygia guttata ENSTGUG00000000641 I 0.767
PTBP1 Homo sapiens ENSG00000011304 D 0.782
PTBP1 Canis familiaris ENSCAFG00000019693 I 0.782
PTBP1 Callithrix jacchus ENSCJAG00000020162 I 0.774
ptbp1 Xenopus tropicalis ENSXETG00000021661 I 0.705
PTBP1 Cavia porcellus ENSCPOG00000025512 I 0.785
PTBP1 Takifugu rubripes ENSTRUG00000011360 I 0.717
PTBP1 Pteropus vampyrus ENSPVAG00000008288 I 0.767
PTBP1 Tursiops truncatus ENSTTRG00000003439 I 0.759
Ptbp1 Dipodomys ordii ENSDORG00000002835 I 0.712
ptbp1a Danio rerio ENSDARG00000019362 I 0.736
ptbp1b Danio rerio ENSDARG00000031907 I 0.720
PTBP2 Taeniopygia guttata ENSTGUG00000005558 I 0.957
PTBP2 Ornithorhynchus anatinus ENSOANG00000004656 I 0.980
PTBP2 Tetraodon nigroviridis ENSTNIG00000018950 I 0.849
PTBP2 Oryctolagus cuniculus ENSOCUG00000017608 I 0.980
Ptbp2 Rattus norvegicus ENSRNOG00000010827 I 0.977
PTBP2 Oryzias latipes ENSORLG00000013557 I 0.826
PTBP2 Tursiops truncatus ENSTTRG00000012904 I 0.980
PTBP2 Oryzias latipes ENSORLG00000019191 I 0.812
PTBP2 Tarsius syrichta ENSTSYG00000002576 I 0.980
PTBP2 Spermophilus tridecemlineatus ENSSTOG00000011727 I 0.883
PTBP2 Pan troglodytes ENSPTRG00000000987 I 0.980
PTBP2 Vicugna pacos ENSVPAG00000002841 I 0.980
Ptbp2 Mus musculus ENSMUSG00000028134 I 0.980
PTBP2 Dasypus novemcinctus ENSDNOG00000017687 N 0.837
PTBP2 Gasterosteus aculeatus ENSGACG00000014892 I 0.815
PTBP2 Gasterosteus aculeatus ENSGACG00000000940 I 0.797
Ptbp2 Dipodomys ordii ENSDORG00000011260 N 0.773
PTBP2 Gorilla gorilla ENSGGOG00000000659 I 0.980
PTBP2 Cavia porcellus ENSCPOG00000003762 I 0.980
PTBP2 Loxodonta africana ENSLAFG00000017343 I 0.980
PTBP2 Meleagris gallopavo ENSMGAG00000007308 I 0.973
PTBP2 Microcebus murinus ENSMICG00000008543 I 0.895
PTBP2 Anolis carolinensis ENSACAG00000005600 I 0.957
PTBP2 Monodelphis domestica ENSMODG00000004211 I 0.977
PTBP2 Danio rerio ENSDARG00000015901 I 0.846
PTBP2 Canis familiaris ENSCAFG00000020080 I 0.980
PTBP2 Macaca mulatta ENSMMUG00000016130 I 0.980
PTBP2 Homo sapiens ENSG00000117569 I 0.980
Q5F456_CHICK Gallus gallus ENSGALG00000001962 I 0.774
Q9YI60_CHICK Gallus gallus ENSGALG00000005552 I 0.973
Rod1 Mus musculus ENSMUSG00000028382 I 0.735
ROD1 Danio rerio ENSDARG00000043757 I 0.734
ROD1 Cavia porcellus ENSCPOG00000011586 I 0.735
rod1 Xenopus tropicalis ENSXETG00000002225 I 0.716
ROD1 Callithrix jacchus ENSCJAG00000017686 I 0.720
ROD1 Bos taurus ENSBTAG00000016750 I 0.727
ROD1 Loxodonta africana ENSLAFG00000011358 I 0.728
ROD1 Equus caballus ENSECAG00000021243 I 0.742
ROD1 Monodelphis domestica ENSMODG00000005502 I 0.732
ROD1 Oryctolagus cuniculus ENSOCUG00000017670 I 0.735
ROD1 Macaca mulatta ENSMMUG00000000464 I 0.732
ROD1 Gorilla gorilla ENSGGOG00000001755 I 0.732
ROD1 Anolis carolinensis ENSACAG00000017316 I 0.732
ROD1 Pan troglodytes ENSPTRG00000021263 I 0.732
Rod1 Rattus norvegicus ENSRNOG00000016334 I 0.735
ROD1 Sus scrofa ENSSSCG00000005466 I 0.742
ROD1 Homo sapiens ENSG00000119314 I 0.732
XR_025154.1 Pan troglodytes ENSPTRG00000010165 I 0.782