cassava23405.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava23405.valid.m1 T49197_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.855
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
cassava23405.valid.m1 RRM 15 83

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma10g28100.1 Glycine max Glyma10g28100.1 N 0.000
Glyma20g22120.1 Glycine max Glyma20g22120.1 N 0.000
Sjc_0041920 Schistosoma japonicum Sjc_0041920 N 0.000
Sjc_0049130 Schistosoma japonicum Sjc_0049130 N 0.000
Sjc_0069260 Schistosoma japonicum Sjc_0069260 N 0.000
Sjc_0072920 Schistosoma japonicum Sjc_0072920 N 0.000
Sjc_0073190 Schistosoma japonicum Sjc_0073190 N 0.000
Sjc_0110320 Schistosoma japonicum Sjc_0110320 N 0.000
Sjc_0117630 Schistosoma japonicum Sjc_0117630 N 0.000